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Department of Plant Sciences

UC Davis

Transcriptomic analysis reveals differential gene expression in common bean (Phaseoulus vulgaris) for aluminum resistance

Abstract

Common bean is the most important food legume in the world particularly for developing countries in the tropics, where it is produced on acid and Al-toxic soils. Al resistance in bean is known to be achieved through exudation of citrate from the root tip which chelates Al to a nontoxic form after a lag phase. Here we report on Al-induced transcriptional changes in the root tips of an Al-resistant bean cultivar using suppression subtractive hybridization. Four hours of Al treatment resulted in differential expression of a rage of genes. Genes involved in stress response, plant defense, signal transduction and translation were up-regulated while genes involved in metabolism were largely down-regulated. In addition, we also identified key genes involved in Al resistance. These include: voltage-dependent anion-selective channel, NADP-specific isocitrate dehydrogenase, Cytochrome P450 monooxygenase and F1-ATPase. The role of these genes in Al resistance is discussed.

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