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    <title>Recent bcoe_me_oapolicydeposits items</title>
    <link>https://escholarship.org/uc/bcoe_me_oapolicydeposits/rss</link>
    <description>Recent eScholarship items from Mechanical Engineering Department Open Access Policy Deposits</description>
    <pubDate>Tue, 4 Aug 2026 07:15:57 +0000</pubDate>
    <item>
      <title>Accounting for Area Sources in Air Pollution Models</title>
      <link>https://escholarship.org/uc/item/4kp9773h</link>
      <description>Area sources are important components of comprehensive air pollution models. The literature describes several approaches to modeling dispersion from such sources, but there is little consensus on an approach that can be applied to arbitrarily shaped area sources and is numerically efficient at the same time. This paper brings together ideas from previous work to propose an approach that meets these requirements. It is based on representing an area source as a set of line sources perpendicular to the wind direction; the number of line sources is determined by the specified precision of the concentration computed at a receptor impacted by the area source. Although AERMOD and the OML model incorporate versions of this approach, the open literature lacks an adequate description. This paper fills this important gap and also provides examples of its application. We show that different shaped area sources with the same emissions and emission density yield significantly different downwind...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/4kp9773h</guid>
      <pubDate>Sat, 20 Dec 2025 00:00:00 +0000</pubDate>
      <author>
        <name>Venkatram, Akula</name>
        <uri>https://orcid.org/0000-0003-0544-1182</uri>
      </author>
      <author>
        <name>Thiruvenkatachari, Ranga Rajan</name>
      </author>
    </item>
    <item>
      <title>Nanoscale detection of metastable states in porous and granular media</title>
      <link>https://escholarship.org/uc/item/5zb4c7b8</link>
      <description>Microseismicity in subsurface geologic environments, such as sandstone gas reservoirs, is expected in the presence of liquid or gas injection. Although difficult to predict, the potential for microseismic events is important to field-scale projects, such as geologic storage of CO2, whereby the gas is injected into natural sandstone formations. We conjecture that a primary factor causing microseismicity is the existence of metastable states in a granular porous medium and provide experimental evidence for its validity. External perturbation triggers abrupt relaxation events which, with a certain probability, can grow into macroscopic microseismic events. Here, the triggering perturbation is produced by cooling to a cryogenic temperature. As the "sensor" for the abrupt relaxation events, we use thin Al films deposited on the sandstone surface. We show that as the temperature is varied, the films' resistance exhibits sharp jumps, which we attribute to mechanical restructuring or...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5zb4c7b8</guid>
      <pubDate>Mon, 13 Oct 2025 00:00:00 +0000</pubDate>
      <author>
        <name>Ilin, Eduard</name>
      </author>
      <author>
        <name>Li, Yaofa</name>
      </author>
      <author>
        <name>Colla, Eugene V</name>
      </author>
      <author>
        <name>Christensen, Kenneth T</name>
      </author>
      <author>
        <name>Sahimi, Muhammad</name>
      </author>
      <author>
        <name>Marchevsky, Maxim</name>
        <uri>https://orcid.org/0000-0001-7283-9305</uri>
      </author>
      <author>
        <name>Frailey, Scott M</name>
      </author>
      <author>
        <name>Bezryadin, Alexey</name>
      </author>
    </item>
    <item>
      <title>A review of microfluidic approaches for carbon capture and storage research</title>
      <link>https://escholarship.org/uc/item/0pm919sz</link>
      <description>The reliance on fossil fuels for the increasing global energy demand necessitates the advancement of carbon capture and storage technologies to mitigate anthropogenic CO&lt;sub&gt;2&lt;/sub&gt; emissions. However, conventional experimental platforms have reached their practical limitations, stagnating further advancements in optimizing carbon capture and storage (CCS) processes. Microfluidic technologies have emerged as promising tools for investigating and optimizing CCS processes at the microscale, offering precise control over gas-liquid interactions, reaction kinetics, and multiphase flow dynamics, which would be very challenging with conventional macroscale platforms. This review uniquely consolidates carbon capture and storage advancements, providing a structured approach that starts from fundamental mechanisms and systematically progresses to advanced microfluidic-assisted CCS strategies. Unlike prior reports, this review demonstrates how microfluidics complements conventional macroscale...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0pm919sz</guid>
      <pubDate>Mon, 13 Oct 2025 00:00:00 +0000</pubDate>
      <author>
        <name>Ratanpara, Abhishek</name>
      </author>
      <author>
        <name>Li, Yaofa</name>
        <uri>https://orcid.org/0000-0002-5505-3199</uri>
      </author>
      <author>
        <name>Kim, Myeongsub</name>
      </author>
    </item>
    <item>
      <title>Tumor growth inhibition by mSTEAP peptide nanovaccine inducing augmented CD8+ T cell immune responses</title>
      <link>https://escholarship.org/uc/item/7kt969gs</link>
      <description>Poly(lactic-co-glycolic) acid (PLGA) has been successfully used in drug delivery and biomaterial applications, but very little attention has been directed towards the potential in vivo effects of peptide-loaded PLGA nanoparticles (NPs), specifically the potency of intravenous (IV) STEAP peptide-loaded PLGA-NP (nanovaccine) dosing and whether STEAP-specific CD8+ T cells directly play a key role in tumor inhibition. To address these concerns, syngeneic prostate cancer mouse models were established and treated with either mSTEAP peptide emulsified in incomplete Freund’s adjuvant (IFA) via subcutaneous (SC) injection or mSTEAP peptide nanovaccine containing the same amount of peptide via IV or SC injection. Meanwhile, mice were treated with either CD8b mAb followed by nanovaccine treatment, free mSTEAP peptide, or empty PLGA-NPs. Immune responses in these mice were examined using cytotoxicity assays at 14&amp;nbsp;days after treatment. Tumor size and survival in various treatment groups...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/7kt969gs</guid>
      <pubDate>Thu, 9 Oct 2025 00:00:00 +0000</pubDate>
      <author>
        <name>Chen, Qiuqiang</name>
      </author>
      <author>
        <name>Bao, Ying</name>
      </author>
      <author>
        <name>Burner, Danielle</name>
      </author>
      <author>
        <name>Kaushal, Sharmeela</name>
      </author>
      <author>
        <name>Zhang, Yu</name>
      </author>
      <author>
        <name>Mendoza, Theresa</name>
      </author>
      <author>
        <name>Bouvet, Michael</name>
      </author>
      <author>
        <name>Ozkan, Cengiz</name>
        <uri>https://orcid.org/0000-0001-6751-6851</uri>
      </author>
      <author>
        <name>Minev, Boris</name>
      </author>
      <author>
        <name>Ma, Wenxue</name>
        <uri>https://orcid.org/0000-0001-9228-6162</uri>
      </author>
    </item>
    <item>
      <title>Control of brain network dynamics across diverse scales of space and time</title>
      <link>https://escholarship.org/uc/item/5b3116m2</link>
      <description>The human brain is composed of distinct regions that are each associated with particular functions and distinct propensities for the control of neural dynamics. However, the relation between these functions and control profiles is poorly understood, as is the variation in this relation across diverse scales of space and time. Here we probe the relation between control and dynamics in brain networks constructed from diffusion tensor imaging data in a large community sample of young adults. Specifically, we probe the control properties of each brain region and investigate their relationship with dynamics across various spatial scales using the Laplacian eigenspectrum. In addition, through analysis of regional modal controllability and partitioning of modes, we determine whether the associated dynamics are fast or slow, as well as whether they are alternating or monotone. We find that brain regions that facilitate the control of energetically easy transitions are associated with...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5b3116m2</guid>
      <pubDate>Fri, 18 Jul 2025 00:00:00 +0000</pubDate>
      <author>
        <name>Tang, Evelyn</name>
      </author>
      <author>
        <name>Ju, Harang</name>
      </author>
      <author>
        <name>Baum, Graham L</name>
      </author>
      <author>
        <name>Roalf, David R</name>
      </author>
      <author>
        <name>Satterthwaite, Theodore D</name>
      </author>
      <author>
        <name>Pasqualetti, Fabio</name>
        <uri>https://orcid.org/0000-0002-8457-8656</uri>
      </author>
      <author>
        <name>Bassett, Danielle S</name>
      </author>
    </item>
    <item>
      <title>Whole-brain causal discovery using fMRI</title>
      <link>https://escholarship.org/uc/item/9gx4g09v</link>
      <description>Despite significant research, discovering causal relationships from fMRI remains a challenge. Popular methods such as Granger causality and dynamic causal modeling fall short in handling contemporaneous effects and latent common causes. Methods from causal structure learning literature can address these limitations but often scale poorly with network size and need acyclicity. In this study, we first provide a taxonomy of existing methods and compare their accuracy and efficiency on simulated fMRI from simple topologies. This analysis demonstrates a pressing need for more accurate and scalable methods, motivating the design of Causal discovery for Large-scale Low-resolution Time-series with Feedback (CaLLTiF). CaLLTiF is a constraint-based method that uses conditional independence between contemporaneous and lagged variables to extract causal relationships. On simulated fMRI from the macaque connectome, CaLLTiF achieves significantly higher accuracy and scalability than all tested...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9gx4g09v</guid>
      <pubDate>Fri, 11 Apr 2025 00:00:00 +0000</pubDate>
      <author>
        <name>Arab, Fahimeh</name>
      </author>
      <author>
        <name>Ghassami, AmirEmad</name>
      </author>
      <author>
        <name>Jamalabadi, Hamidreza</name>
      </author>
      <author>
        <name>Peters, Megan AK</name>
        <uri>https://orcid.org/0000-0002-0248-0816</uri>
      </author>
      <author>
        <name>Nozari, Erfan</name>
        <uri>https://orcid.org/0000-0002-1981-8959</uri>
      </author>
    </item>
    <item>
      <title>A novel microfluidic approach to quantify pore-scale mineral dissolution in porous media</title>
      <link>https://escholarship.org/uc/item/2nr0f72h</link>
      <description>Mineral dissolution in porous media coupled with single- and/or multi-phase flows is pervasive in natural and engineering systems. Dissolution modifies the physical, hydrological, and geochemical properties of the solid matrix, resulting in a complex coupling between local dissolution rate and pore-scale flow. The work reports a microfluidic approach that includes 2D reactive porous media and advanced pore flow diagnostics for the study of pore-scale dissolution in porous media with unprecedented details. The 2D microfluidic porous media, called micromodels, were fabricated in calcite by combining photolithography and wet etching, which not only offers precise control over the structural and chemical properties, but also facilitate unobstructed optical access to the pore flow, significantly improving over existing methods. We believe the work represents the first of its kind as it for the first time directly applies photolithography to calcite samples and demonstrates the use...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/2nr0f72h</guid>
      <pubDate>Thu, 3 Apr 2025 00:00:00 +0000</pubDate>
      <author>
        <name>Musabbir Rahman, Rafid</name>
      </author>
      <author>
        <name>Niemur, Elliott</name>
      </author>
      <author>
        <name>Blois, Gianluca</name>
      </author>
      <author>
        <name>Kazemifar, Farzan</name>
      </author>
      <author>
        <name>Kim, Myeongsub</name>
      </author>
      <author>
        <name>Li, Yaofa</name>
        <uri>https://orcid.org/0000-0002-5505-3199</uri>
      </author>
    </item>
    <item>
      <title>Spontaneous snapping-induced jet flows for fast, maneuverable surface and underwater soft flapping swimmer</title>
      <link>https://escholarship.org/uc/item/1tc2v20h</link>
      <description>Manta rays use wing-like pectoral fins for intriguing oscillatory swimming. It provides rich inspiration for designing potentially fast, efficient, and maneuverable soft swimming robots, which, however, have yet to be realized. It remains a grand challenge to combine fast speed, high efficiency, and high maneuverability in a single soft swimmer while using simple actuation and control. Here, we report leveraging spontaneous snapping stroke in the monostable flapping wing of a manta-like soft swimmer to address the challenge. The monostable wing is pneumatically actuated to instantaneously snap through to stroke down, and upon deflation, it will spontaneously stroke up by snapping back to its initial state, driven by elastic restoring force, without consuming additional energy. This largely simplifies designs, actuation, and control for achieving a record-high speed of 6.8 body length per second, high energy efficiency, and high maneuverability and collision resilience in navigating...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/1tc2v20h</guid>
      <pubDate>Fri, 20 Dec 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Qing, Haitao</name>
      </author>
      <author>
        <name>Guo, Jiacheng</name>
      </author>
      <author>
        <name>Zhu, Yuanhang</name>
        <uri>https://orcid.org/0000-0002-2080-1142</uri>
      </author>
      <author>
        <name>Chi, Yinding</name>
      </author>
      <author>
        <name>Hong, Yaoye</name>
      </author>
      <author>
        <name>Quinn, Daniel</name>
      </author>
      <author>
        <name>Dong, Haibo</name>
      </author>
      <author>
        <name>Yin, Jie</name>
      </author>
    </item>
    <item>
      <title>Visceral pleura mechanics: Characterization of human, pig, and rat lung material properties</title>
      <link>https://escholarship.org/uc/item/9h72r20x</link>
      <description>Pulmonary air leaks are amongst the most common complications in lung surgery. Lung sealants are applied to the organ surface and need to synchronously stretch with the visceral pleura, the layer of tissue which encompasses the lung parenchymal tissue. These adhesives are commonly tested on pig and rat lungs, but applied to human lungs. However, the unknown mechanics of human lung visceral pleura undermines the clinical translatability of such animal-tested sealants and the absence of how pig and rat lung visceral pleura compare to human tissues is necessary to address. Here we quantify the biaxial planar tensile mechanics of visceral pleura from healthy transplant-eligible and smoker human lungs for the first time, and further compare the material behaviors to pig and rat lung visceral pleura. Initial and final stiffness moduli, maximum stress, low-to-high strain transition, and stress relaxation are analyzed and compared between and within groups, further considering regional...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9h72r20x</guid>
      <pubDate>Thu, 5 Dec 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Ramirez, Gustavo O</name>
      </author>
      <author>
        <name>Mariano, Crystal A</name>
      </author>
      <author>
        <name>Carter, David</name>
      </author>
      <author>
        <name>Eskandari, Mona</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
    </item>
    <item>
      <title>A self-healing plastic ceramic electrolyte by an aprotic dynamic polymer network for lithium metal batteries</title>
      <link>https://escholarship.org/uc/item/1wx8s5r5</link>
      <description>Oxide ceramic electrolytes (OCEs) have great potential for solid-state lithium metal (Li0) battery applications because, in theory, their high elastic modulus provides better resistance to Li0 dendrite growth. However, in practice, OCEs can hardly survive critical current densities higher than 1 mA/cm2. Key issues that contribute to the breakdown of OCEs include Li0 penetration promoted by grain boundaries (GBs), uncontrolled side reactions at electrode-OCE interfaces, and, equally importantly, defects evolution (e.g., void growth and crack propagation) that leads to local current concentration and mechanical failure inside and on OCEs. Here, taking advantage of a dynamically crosslinked aprotic polymer with non-covalent –CH3⋯CF3 bonds, we developed a plastic ceramic electrolyte (PCE) by hybridizing the polymer framework with ionically conductive ceramics. Using in-situ synchrotron X-ray technique and Cryogenic transmission electron microscopy (Cryo-TEM), we uncover that the PCE...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/1wx8s5r5</guid>
      <pubDate>Mon, 2 Dec 2024 00:00:00 +0000</pubDate>
      <author>
        <name>He, Yubin</name>
      </author>
      <author>
        <name>Wang, Chunyang</name>
      </author>
      <author>
        <name>Zhang, Rui</name>
      </author>
      <author>
        <name>Zou, Peichao</name>
      </author>
      <author>
        <name>Chen, Zhouyi</name>
      </author>
      <author>
        <name>Bak, Seong-Min</name>
      </author>
      <author>
        <name>Trask, Stephen E</name>
      </author>
      <author>
        <name>Du, Yonghua</name>
      </author>
      <author>
        <name>Lin, Ruoqian</name>
        <uri>https://orcid.org/0000-0003-3907-2231</uri>
      </author>
      <author>
        <name>Hu, Enyuan</name>
      </author>
      <author>
        <name>Xin, Huolin L</name>
      </author>
    </item>
    <item>
      <title>Predictive modeling of evoked intracranial EEG response to medial temporal lobe stimulation in patients with epilepsy</title>
      <link>https://escholarship.org/uc/item/611238wb</link>
      <description>Despite promising advancements, closed-loop neurostimulation for drug-resistant epilepsy (DRE) still relies on manual tuning and produces variable outcomes, while automated predictable algorithms remain an aspiration. As a fundamental step towards addressing this gap, here we study predictive dynamical models of human intracranial EEG (iEEG) response under parametrically rich neurostimulation. Using data from n = 13 DRE patients, we find that stimulation-triggered switched-linear models with ~300 ms of causal historical dependence best explain evoked iEEG dynamics. These models are highly consistent across different stimulation amplitudes and frequencies, allowing for learning a generalizable model from abundant STIM OFF and limited STIM ON data. Further, evoked iEEG in nearly all subjects exhibited a distance-dependent pattern, whereby stimulation directly impacts the actuation site and nearby regions (≲&amp;nbsp;20 mm), affects medium-distance regions (20&amp;nbsp;~&amp;nbsp;100 mm) through...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/611238wb</guid>
      <pubDate>Sat, 2 Nov 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Acharya, Gagan</name>
      </author>
      <author>
        <name>Davis, Kathryn A</name>
      </author>
      <author>
        <name>Nozari, Erfan</name>
        <uri>https://orcid.org/0000-0002-1981-8959</uri>
      </author>
    </item>
    <item>
      <title>Nonthermal Plasma Activation of Adsorbates: The Case of CO on Pt</title>
      <link>https://escholarship.org/uc/item/79q6q1m5</link>
      <description>Nonthermal plasmas provide a unique approach to electrically driven heterogeneous catalytic processes. Despite much interest from the community, fundamental activation pathways in these processes remain poorly understood. Here, we investigate how exposure to a nonthermal plasma sustained in an argon nonreactive atmosphere affects the desorption of carbon monoxide (CO) from platinum nanoparticles. Temperature-programmed desorption measurements indicate that the plasma reduces the effective binding energy (BE) of CO to Pt surfaces by as much as ∼0.3 eV, with the reduction in the BE scaling linearly with the plasma density. We find that the effective CO BE is most strongly reduced for under-coordinated sites (steps and edges) compared to well-coordinated sites (terraces). Density functional theory calculations suggest that this is due to plasma-induced charging and electric fields at the catalyst surface, which preferentially affect under-coordinated sites. This study provides direct...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/79q6q1m5</guid>
      <pubDate>Thu, 19 Sep 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Kim, Minseok</name>
      </author>
      <author>
        <name>Biswas, Sohag</name>
      </author>
      <author>
        <name>Alvarez, Isabel Barraza</name>
      </author>
      <author>
        <name>Christopher, Phillip</name>
        <uri>https://orcid.org/0000-0002-4898-5510</uri>
      </author>
      <author>
        <name>Wong, Bryan M</name>
        <uri>https://orcid.org/0000-0002-3477-8043</uri>
      </author>
      <author>
        <name>Mangolini, Lorenzo</name>
        <uri>https://orcid.org/0000-0002-0057-2450</uri>
      </author>
    </item>
    <item>
      <title>Random laser imaging of bovine pericardium under the uniaxial tensile test.</title>
      <link>https://escholarship.org/uc/item/57q1t48m</link>
      <description>We demonstrate random laser (RL) emission from within bovine pericardium (BP) tissue. The interest in BP relies on its wide use as a valve replacement and as a biological patch. By imaging the emitting tissue, we show that RL emission is mostly generated inside the collagen fibers. Multimode RL operation is thus achieved within the volume of each fiber. Image analysis reveals that the intensity of the RL emission from individual fibers is dependent on the relative orientation to the stress axis. Our results suggest that RL intensity may be used as an indicator of stress concentration in individual fibers.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/57q1t48m</guid>
      <pubDate>Fri, 30 Aug 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Cuando-Espitia, Natanael</name>
      </author>
      <author>
        <name>Sánchez-Arévalo, Francisco</name>
      </author>
      <author>
        <name>Hernández-Cordero, Juan</name>
      </author>
    </item>
    <item>
      <title>Optothermal generation, trapping, and manipulation of microbubbles.</title>
      <link>https://escholarship.org/uc/item/9928w4sd</link>
      <description>The most common approach to optically generate and manipulate bubbles in liquids involves temperature gradients induced by CW lasers. In this work, we present a method to accomplish both the generation of microbubbles and their 3D manipulation in ethanol through optothermal forces. These forces are triggered by light absorption from a nanosecond pulsed laser (λ = 532 nm) at silver nanoparticles photodeposited at the distal end of a multimode optical fiber. Light absorbed from each laser pulse quickly heats up the silver-ethanol interface beyond the ethanol critical-point (∼ 243 °C) before the heat diffuses through the liquid. Therefore, the liquid achieves a metastable state and owing to spontaneous nucleation converted to a vapor bubble attached to the optical fiber. The bubble grows with semi-spherical shape producing a counterjet in the final stage of the collapse. This jet reaches the hot nanoparticles vaporizing almost immediately and ejecting a microbubble. This microbubble-generation...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9928w4sd</guid>
      <pubDate>Thu, 15 Aug 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Sarabia-Alonso, JA</name>
      </author>
      <author>
        <name>Ortega-Mendoza, JG</name>
      </author>
      <author>
        <name>Ramírez-San-Juan, JC</name>
      </author>
      <author>
        <name>Zaca-Morán, P</name>
      </author>
      <author>
        <name>Ramírez-Ramírez, J</name>
      </author>
      <author>
        <name>Padilla-Vivanco, A</name>
      </author>
      <author>
        <name>Muñoz-Pérez, FM</name>
      </author>
      <author>
        <name>Ramos-García, R</name>
      </author>
    </item>
    <item>
      <title>Trapping and manipulation of a microbubble in 3D through temperature gradients</title>
      <link>https://escholarship.org/uc/item/7c56n32f</link>
      <description>Trapping and manipulation of a microbubble in 3D through temperature gradients</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/7c56n32f</guid>
      <pubDate>Thu, 15 Aug 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Pérez, FM Muñoz</name>
      </author>
      <author>
        <name>Sarabia-Alonso, JA</name>
      </author>
      <author>
        <name>Padilla-Vivanco, A</name>
      </author>
      <author>
        <name>Toxqui-Quitl, C</name>
      </author>
      <author>
        <name>Ortega-Mendoza, JG</name>
      </author>
      <author>
        <name>Ramos-García, R</name>
      </author>
    </item>
    <item>
      <title>Optical trapping in the presence of laser-induced thermal effects.</title>
      <link>https://escholarship.org/uc/item/5qk5v9qq</link>
      <description>The inclusion of thermal effects in optical manipulation has been explored in diverse experiments, increasing the possibilities for applications in diverse areas. In this Letter, the results of combined optical and thermal manipulation in the vicinity of a highly absorbent hydrogenated amorphous silicon layer, which induces both the generation of convective currents and thermophoresis, are presented. In combination with the optical forces, thermal forces help reduce the optical power required to trap and manipulate micrometric polystyrene beads. Moreover, the inclusion of these effects allows the stacking and manipulation of multiple particles with a single optical trap along with the beam propagation, providing an extra tool for micromanipulation of a variety of samples.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5qk5v9qq</guid>
      <pubDate>Thu, 15 Aug 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Zenteno-Hernandez, JA</name>
      </author>
      <author>
        <name>Vázquez Lozano, J</name>
      </author>
      <author>
        <name>Sarabia-Alonso, JA</name>
      </author>
      <author>
        <name>Ramírez-Ramírez, J</name>
      </author>
      <author>
        <name>Ramos-García, R</name>
      </author>
    </item>
    <item>
      <title>3D trapping of microbubbles by the Marangoni force.</title>
      <link>https://escholarship.org/uc/item/1mz957dh</link>
      <description>In this Letter, we show 3D steady-state trapping and manipulation of vapor bubbles in liquids employing a low-power continuous-wave laser using the Marangoni effect. Light absorption from photodeposited silver nanoparticles on the distal end of a multi-mode optical fiber is used to produce bubbles of different diameters. The thermal effects produced by either the nanoparticles on the fiber tip or the light bulk absorption modulate the surface tension of the bubble wall and creates both longitudinal and transversal forces just like optical forces, effectively creating a 3D potential well. Using numerical simulations, we obtain expressions for the temperature profiles and present analytical expressions for the Marangoni force. In addition, using an array of three fibers with photodeposited nanoparticles is used to demonstrate the transfer of bubbles from one fiber to another by sequentially switching on and off the lasers.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/1mz957dh</guid>
      <pubDate>Thu, 15 Aug 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Sarabia-Alonso, JA</name>
      </author>
      <author>
        <name>Ortega-Mendoza, JG</name>
      </author>
      <author>
        <name>Mansurova, S</name>
      </author>
      <author>
        <name>Muñoz-Pérez, FM</name>
      </author>
      <author>
        <name>Ramos-García, R</name>
      </author>
    </item>
    <item>
      <title>Formation and manipulation of 2D colloidal crystals driven by convective currents and electrostatic forces</title>
      <link>https://escholarship.org/uc/item/1731w24t</link>
      <description>Formation and manipulation of 2D colloidal crystals driven by convective currents and electrostatic forces</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/1731w24t</guid>
      <pubDate>Thu, 15 Aug 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Ramírez-Ramírez, J</name>
      </author>
      <author>
        <name>Sarabia-Alonso, JA</name>
      </author>
      <author>
        <name>Vázquez-Lozano, J</name>
      </author>
      <author>
        <name>Peregrina-Barreto, H</name>
      </author>
      <author>
        <name>Mansurova, S</name>
      </author>
      <author>
        <name>Ramos-García, R</name>
      </author>
    </item>
    <item>
      <title>Marangoni force-driven manipulation of photothermally-induced microbubbles.</title>
      <link>https://escholarship.org/uc/item/10m6w6z5</link>
      <description>The generation and manipulation of microbubbles by means of temperature gradients induced by low power laser radiation is presented. A laser beam (λ = 1064 nm) is divided into two equal parts and coupled to two multimode optical fibers. The opposite ends of each fiber are aligned and separated a distance D within an ethanol solution. Previously, silver nanoparticles were photo deposited on the optical fibers ends. Light absorption at the nanoparticles produces a thermal gradient capable of generating a microbubble at the optical fibers end in non-absorbent liquids. The theoretical and experimental studies carried out showed that by switching the thermal gradients, it is possible to generate forces in opposite directions, causing the migration of microbubbles from one fiber optic tip to another. Marangoni force induced by surface tension gradients in the bubble wall is the driving force behind the manipulation of microbubbles. We estimated a maximum Marangoni force of 400nN for...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/10m6w6z5</guid>
      <pubDate>Thu, 15 Aug 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Ortega-Mendoza, JG</name>
      </author>
      <author>
        <name>Sarabia-Alonso, JA</name>
      </author>
      <author>
        <name>Zaca-Morán, P</name>
      </author>
      <author>
        <name>Padilla-Vivanco, A</name>
      </author>
      <author>
        <name>Toxqui-Quitl, C</name>
      </author>
      <author>
        <name>Rivas-Cambero, I</name>
      </author>
      <author>
        <name>Ramirez-Ramirez, J</name>
      </author>
      <author>
        <name>Torres-Hurtado, SA</name>
      </author>
      <author>
        <name>Ramos-García, R</name>
      </author>
    </item>
    <item>
      <title>Self-oscillation of 3D trapped bubbles</title>
      <link>https://escholarship.org/uc/item/45j984jw</link>
      <description>Self-oscillation of 3D trapped bubbles</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/45j984jw</guid>
      <pubDate>Thu, 1 Aug 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Sarabia-Alonso, JA</name>
        <uri>https://orcid.org/0000-0002-1655-4812</uri>
      </author>
      <author>
        <name>Pérez-Corte, JM</name>
      </author>
      <author>
        <name>Ortega-Mendoza, JG</name>
        <uri>https://orcid.org/0000-0002-4913-8444</uri>
      </author>
      <author>
        <name>Ortega-Sánchez, K</name>
      </author>
      <author>
        <name>Becerra-Hernández, A</name>
      </author>
      <author>
        <name>Gúzman-Barraza, A</name>
      </author>
      <author>
        <name>Ramos-García, R</name>
        <uri>https://orcid.org/0000-0002-2712-4981</uri>
      </author>
    </item>
    <item>
      <title>Optothermal generation, steady-state trapping, and 3D manipulation of bubbles: an experimental and theoretical analysis of the Marangoni effect</title>
      <link>https://escholarship.org/uc/item/2kx1r5cm</link>
      <description>Abstract: 

               Since Nobel Laureate Arthur Ashkin first introduced the trapping and manipulation of microparticles using light, numerous studies have explored this technique not only for dielectric/metallic particles but also for organic matter. This advancement has significantly expanded the landscape of non-contact and non-invasive micromanipulation at the nanometric scale. However, micromanipulation of particles with a refractive index smaller than the host medium, n
                  p
                  &amp;lt; n
                  m, proves challenging with Gaussian beams. To overcome this obstacle, a force known as thermocapillary, or the Marangoni force, has emerged as a straightforward trapping mechanism for bubbles in liquids. The Marangoni force results from the surface tension of bubbles, induced either thermally or chemically—by creating a temperature gradient or adding surfactants, respectively. The surface tension gradient on the liquid host induces tangential...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/2kx1r5cm</guid>
      <pubDate>Thu, 1 Aug 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Sarabia-Alonso, Julio Aurelio</name>
      </author>
      <author>
        <name>Ramos-García, Rubén</name>
      </author>
    </item>
    <item>
      <title>Discovering 3D hidden elasticity in isotropic and transversely isotropic materials with physics-informed UNets</title>
      <link>https://escholarship.org/uc/item/00m5b1x1</link>
      <description>Three-dimensional variation in structural components or fiber alignments results in complex mechanical property distribution in tissues and biomaterials. In this paper, we use a physics-informed UNet-based neural network model (El-UNet) to discover the three-dimensional (3D) internal composition and space-dependent material properties of heterogeneous isotropic and transversely isotropic materials without a priori knowledge of the composition. We then show the capabilities of El-UNet by validating against data obtained from finite-element simulations of two soft tissues, namely, brain tissue and articular cartilage, under various loading conditions. We first simulated compressive loading of 3D brain tissue comprising of distinct white matter and gray matter mechanical properties undergoing small strains with isotropic linear elastic behavior, where El-UNet reached mean absolute relative errors under 1.5 % for elastic modulus and Poisson's ratio estimations across the 3D volume....</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/00m5b1x1</guid>
      <pubDate>Thu, 18 Jul 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Kamali, Ali</name>
      </author>
      <author>
        <name>Laksari, Kaveh</name>
        <uri>https://orcid.org/0000-0002-7570-4796</uri>
      </author>
    </item>
    <item>
      <title>In situ enzymatic control of colloidal phoresis and catalysis through hydrolysis of ATP</title>
      <link>https://escholarship.org/uc/item/8687r0nm</link>
      <description>The ability to sense chemical gradients and respond with directional motility and chemical activity is a defining feature of complex living systems. There is a strong interest among scientists to design synthetic systems that emulate these properties. Here, we realize and control such behaviors in a synthetic system by tailoring multivalent interactions of adenosine nucleotides with catalytic microbeads. We first show that multivalent interactions of the bead with gradients of adenosine mono-, di- and trinucleotides (AM/D/TP) control both the phoretic motion and a proton-transfer catalytic reaction, and find that both effects are diminished greatly with increasing valence of phosphates. We exploit this behavior by using enzymatic hydrolysis of ATP to AMP, which downregulates multivalent interactivity in situ. This produces a sudden increase in transport of the catalytic microbeads (a phoretic jump), which is accompanied by increased catalytic activity. Finally, we show how this...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/8687r0nm</guid>
      <pubDate>Wed, 15 May 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Shandilya, Ekta</name>
      </author>
      <author>
        <name>Rallabandi, Bhargav</name>
        <uri>https://orcid.org/0000-0002-7733-8742</uri>
      </author>
      <author>
        <name>Maiti, Subhabrata</name>
      </author>
    </item>
    <item>
      <title>Toward Patient-Specific 3D-Printed Robotic Systems for Surgical Interventions</title>
      <link>https://escholarship.org/uc/item/35k553bf</link>
      <description>Surgical robots have been extensively researched for a wide range of surgical procedures due to the advantages of improved precision, sensing capabilities, motion scaling, and tremor reduction, to name a few. Though the underlying disease condition or pathology may be the same across patients, the intervention approach to treat the condition can vary significantly across patients. This is especially true for endovascular interventions, where each case brings forth its own challenges. Hence it is critical to develop patient-specific surgical robotic systems to maximize the benefits of robot-assisted surgery. Manufacturing patient-specific robots can be challenging for complex procedures and furthermore the time required to build them can be a challenge. To overcome this challenge, additive manufacturing, namely 3D-printing, is a promising solution. 3D-printing enables fabrication of complex parts precisely and efficiently. Although 3D-printing techniques have been researched for...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/35k553bf</guid>
      <pubDate>Tue, 9 Apr 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Desai, Jaydev P</name>
      </author>
      <author>
        <name>Sheng, Jun</name>
        <uri>https://orcid.org/0000-0001-8786-2137</uri>
      </author>
      <author>
        <name>Cheng, Shing Shin</name>
      </author>
      <author>
        <name>Wang, Xuefeng</name>
      </author>
      <author>
        <name>Deaton, Nancy J</name>
      </author>
      <author>
        <name>Rahman, Nahian</name>
      </author>
    </item>
    <item>
      <title>Multiscale homogenization of aluminum honeycomb structures: Thermal analysis with orthotropic representative volume element and finite element method</title>
      <link>https://escholarship.org/uc/item/0532g36v</link>
      <description>This study develops a thermal homogenization model for an aluminum honeycomb panel using the representative volume element (RVE) concept, considering the orthotropic nature of the structure. The RVE thermal homogenization method is a numerical approach for analyzing heterogeneous materials. It employs a constitutive model based on RVE performance to represent thermal behavior. Effective parameters are determined through averaging techniques, and the finite element method solves the thermal problem, accounting for structure topology and material behavior. The resulting heat conduction problem is solved using the finite element method (FEM) to evaluate the effective thermal characteristics. A 3D RVE is generated based on the honeycomb panel's geometry, evaluating thermal conductivity tensor and describing the medium's thermal performance. Numerical tests validate the model by comparing it with the real honeycomb structure under sinusoidal heat flux. Results show good correlation,...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0532g36v</guid>
      <pubDate>Thu, 21 Mar 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Al-Masri, Ali</name>
      </author>
      <author>
        <name>Khanafer, Khalil</name>
      </author>
      <author>
        <name>Vafai, Kambiz</name>
        <uri>https://orcid.org/0000-0002-9720-3618</uri>
      </author>
    </item>
    <item>
      <title>The Role of Nanofluids in Renewable Energy Engineering</title>
      <link>https://escholarship.org/uc/item/6xs5w1rf</link>
      <description>The phenomenon of nanofluid flows is intrinsically characterized by several scales and intricate physical processes [...].</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/6xs5w1rf</guid>
      <pubDate>Fri, 16 Feb 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Bhatti, Muhammad Mubashir</name>
      </author>
      <author>
        <name>Vafai, Kambiz</name>
        <uri>https://orcid.org/0000-0002-9720-3618</uri>
      </author>
      <author>
        <name>Abdelsalam, Sara I</name>
      </author>
    </item>
    <item>
      <title>Neuroimaging, wearable sensors, and blood-based biomarkers reveal hyperacute changes in the brain after sub-concussive impacts</title>
      <link>https://escholarship.org/uc/item/87n7314f</link>
      <description>Impacts in mixed martial arts (MMA) have been studied mainly in regard to the long-term effects of concussions. However, repetitive sub-concussive head impacts at the hyperacute phase (minutes after impact), are not understood. The head experiences rapid acceleration similar to a concussion, but without clinical symptoms. We utilize portable neuroimaging technology - transcranial Doppler (TCD) ultrasound and functional near infrared spectroscopy (fNIRS) - to estimate the extent of pre- and post-differences following contact and non-contact sparring sessions in nine MMA athletes. In addition, the extent of changes in neurofilament light (NfL) protein biomarker concentrations, and neurocognitive/balance parameters were determined following impacts. Athletes were instrumented with sensor-based mouth guards to record head kinematics. TCD and fNIRS results demonstrated significantly increased blood flow velocity (&lt;i&gt;p&lt;/i&gt; = 0.01) as well as prefrontal (&lt;i&gt;p&lt;/i&gt; = 0.01) and motor cortex...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/87n7314f</guid>
      <pubDate>Thu, 15 Feb 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Grijalva, Carissa</name>
      </author>
      <author>
        <name>Mullins, Veronica A</name>
      </author>
      <author>
        <name>Michael, Bryce R</name>
      </author>
      <author>
        <name>Hale, Dallin</name>
      </author>
      <author>
        <name>Wu, Lyndia</name>
      </author>
      <author>
        <name>Toosizadeh, Nima</name>
      </author>
      <author>
        <name>Chilton, Floyd H</name>
      </author>
      <author>
        <name>Laksari, Kaveh</name>
        <uri>https://orcid.org/0000-0002-7570-4796</uri>
      </author>
    </item>
    <item>
      <title>End to end stroke triage using cerebrovascular morphology and machine learning</title>
      <link>https://escholarship.org/uc/item/31q6c5kg</link>
      <description>Background: Rapid and accurate triage of acute ischemic stroke (AIS) is essential for early revascularization and improved patient outcomes. Response to acute reperfusion therapies varies significantly based on patient-specific cerebrovascular anatomy that governs cerebral blood flow. We present an end-to-end machine learning approach for automatic stroke triage.
Methods: Employing a validated convolutional neural network (CNN) segmentation model for image processing, we extract each patient's cerebrovasculature and its morphological features from baseline non-invasive angiography scans. These features are used to detect occlusion's presence and the site automatically, and for the first time, to estimate collateral circulation without manual intervention. We then use the extracted cerebrovascular features along with commonly used clinical and imaging parameters to predict the 90 days functional outcome for each patient.
Results: The CNN model achieved a segmentation accuracy of...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/31q6c5kg</guid>
      <pubDate>Thu, 1 Feb 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Deshpande, Aditi</name>
        <uri>https://orcid.org/0009-0007-7507-1099</uri>
      </author>
      <author>
        <name>Elliott, Jordan</name>
      </author>
      <author>
        <name>Jiang, Bin</name>
      </author>
      <author>
        <name>Tahsili-Fahadan, Pouya</name>
      </author>
      <author>
        <name>Kidwell, Chelsea</name>
      </author>
      <author>
        <name>Wintermark, Max</name>
      </author>
      <author>
        <name>Laksari, Kaveh</name>
        <uri>https://orcid.org/0000-0002-7570-4796</uri>
      </author>
    </item>
    <item>
      <title>A Comparative Study of Ex-Vivo Murine Pulmonary Mechanics Under Positive- and Negative-Pressure Ventilation</title>
      <link>https://escholarship.org/uc/item/1hz8m21t</link>
      <description>Increased ventilator use during the COVID-19 pandemic resurrected persistent questions regarding mechanical ventilation including the difference between physiological and artificial breathing induced by ventilators (i.e., positive- versus negative-pressure ventilation, PPV vs NPV). To address this controversy, we compare murine specimens subjected to PPV and NPV in ex vivo quasi-static loading and quantify pulmonary mechanics via measures of quasi-static and dynamic compliances, transpulmonary pressure, and energetics when varying inflation frequency and volume. Each investigated mechanical parameter yields instance(s) of significant variability between ventilation modes. Most notably, inflation compliance, percent relaxation, and peak pressure are found to be consistently dependent on the ventilation mode. Maximum inflation volume and frequency note varied dependencies contingent on the ventilation mode. Contradictory to limited previous clinical investigations of oxygenation...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/1hz8m21t</guid>
      <pubDate>Mon, 29 Jan 2024 00:00:00 +0000</pubDate>
      <author>
        <name>Quiros, KAM</name>
      </author>
      <author>
        <name>Nelson, TM</name>
      </author>
      <author>
        <name>Ulu, A</name>
      </author>
      <author>
        <name>Dominguez, EC</name>
      </author>
      <author>
        <name>Biddle, TA</name>
      </author>
      <author>
        <name>Lo, DD</name>
        <uri>https://orcid.org/0000-0002-5962-9458</uri>
      </author>
      <author>
        <name>Nordgren, TM</name>
      </author>
      <author>
        <name>Eskandari, M</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
    </item>
    <item>
      <title>Physics-informed UNets for discovering hidden elasticity in heterogeneous materials</title>
      <link>https://escholarship.org/uc/item/01w609qc</link>
      <description>Soft biological tissues often have complex mechanical properties due to variation in structural components. In this paper, we develop a novel UNet-based neural network model for inversion in elasticity (El-UNet) to infer the spatial distributions of mechanical parameters from strain maps as input images, normal stress boundary conditions, and domain physics information. We show superior performance - both in terms of accuracy and computational cost - by El-UNet compared to fully-connected physics-informed neural networks in estimating unknown parameters and stress distributions for isotropic linear elasticity. We characterize different variations of El-UNet and propose a self-adaptive spatial loss weighting approach. To validate our inversion models, we performed various finite-element simulations of isotropic domains with heterogenous distributions of material parameters to generate synthetic data. El-UNet is faster and more accurate than the fully-connected physics-informed...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/01w609qc</guid>
      <pubDate>Thu, 7 Dec 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Kamali, Ali</name>
      </author>
      <author>
        <name>Laksari, Kaveh</name>
        <uri>https://orcid.org/0000-0002-7570-4796</uri>
      </author>
    </item>
    <item>
      <title>Enhancing the Combustion of Magnesium Nanoparticles via Low-Temperature Plasma-Induced Hydrogenation</title>
      <link>https://escholarship.org/uc/item/6m88v514</link>
      <description>The hydrogenation of metal nanoparticles provides a pathway toward tuning their combustion characteristics. Metal hydrides have been employed as solid-fuel additives for rocket propellants, pyrotechnics, and explosives. Gas generation during combustion is beneficial to prevent aggregation and sintering of particles, enabling a more complete fuel utilization. Here, we discuss a novel approach for the synthesis of magnesium hydride nanoparticles based on a two-step aerosol process. Mg particles are first nucleated and grown via thermal evaporation, followed immediately by in-flight exposure to a hydrogen-rich low-temperature plasma. During the second step, atomic hydrogen generated by the plasma rapidly diffuses into the Mg lattice, forming particles with a significant fraction of MgH&lt;sub&gt;2&lt;/sub&gt;. We find that hydrogenated Mg nanoparticles have an ignition temperature that is reduced by ∼200 °C when combusted with potassium perchlorate as an oxidizer, compared to the non-hydrogenated...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/6m88v514</guid>
      <pubDate>Wed, 29 Nov 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Wagner, Brandon</name>
      </author>
      <author>
        <name>Kim, Minseok</name>
      </author>
      <author>
        <name>Chowdhury, Mahbub</name>
      </author>
      <author>
        <name>Pasos, Emmanuel Vidales</name>
      </author>
      <author>
        <name>Hizon, Kimberly</name>
      </author>
      <author>
        <name>Ghildiyal, Pankaj</name>
      </author>
      <author>
        <name>Zachariah, Michael R</name>
        <uri>https://orcid.org/0000-0002-4115-3324</uri>
      </author>
      <author>
        <name>Mangolini, Lorenzo</name>
        <uri>https://orcid.org/0000-0002-0057-2450</uri>
      </author>
    </item>
    <item>
      <title>Assisting Forearm Function in Children With Movement Disorders via A Soft Wearable Robot With Equilibrium-Point Control</title>
      <link>https://escholarship.org/uc/item/983704t9</link>
      <description>Wearable robots are envisioned to amplify the independence of people with movement impairments by providing daily physical assistance. For portable, comfortable, and safe devices, soft pneumatic-based robots are emerging as a potential solution. However, due to the inherent complexities, including compliance and nonlinear mechanical behavior, feedback control for facilitating human-robot interaction remains a challenge. Herein, we present the design, fabrication, and control architecture of a soft wearable robot that assists in supination and pronation of the forearm. The soft wearable robot integrates an antagonistic pair of pneumatic-based helical actuators to provide active pronation and supination torques. Our main contribution is a bio-inspired equilibrium-point control scheme for integrating proprioceptive feedback and exteroceptive input (e.g., the user's muscle activation signals) directly with the on/off valve behavior of the soft pneumatic actuators. The proposed human-robot...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/983704t9</guid>
      <pubDate>Thu, 9 Nov 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Realmuto, Jonathan</name>
        <uri>https://orcid.org/0000-0003-3318-9770</uri>
      </author>
      <author>
        <name>Sanger, Terence D</name>
      </author>
    </item>
    <item>
      <title>Using Deep Learning Models to Predict Prosthetic Ankle Torque</title>
      <link>https://escholarship.org/uc/item/11h171tg</link>
      <description>Inverse dynamics from motion capture is the most common technique for acquiring biomechanical kinetic data. However, this method is time-intensive, limited to a gait laboratory setting, and requires a large array of reflective markers to be attached to the body. A practical alternative must be developed to provide biomechanical information to high-bandwidth prosthesis control systems to enable predictive controllers. In this study, we applied deep learning to build dynamical system models capable of accurately estimating and predicting prosthetic ankle torque from inverse dynamics using only six input signals. We performed a hyperparameter optimization protocol that automatically selected the model architectures and learning parameters that resulted in the most accurate predictions. We show that the trained deep neural networks predict ankle torques one sample into the future with an average RMSE of 0.04 ± 0.02 Nm/kg, corresponding to 2.9 ± 1.6% of the ankle torque's dynamic range....</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/11h171tg</guid>
      <pubDate>Thu, 26 Oct 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Prasanna, Christopher</name>
      </author>
      <author>
        <name>Realmuto, Jonathan</name>
        <uri>https://orcid.org/0000-0003-3318-9770</uri>
      </author>
      <author>
        <name>Anderson, Anthony</name>
      </author>
      <author>
        <name>Rombokas, Eric</name>
      </author>
      <author>
        <name>Klute, Glenn</name>
      </author>
    </item>
    <item>
      <title>Ultrafine Particle Metrics and Research Considerations: Review of the 2015 UFP Workshop</title>
      <link>https://escholarship.org/uc/item/42r1s37d</link>
      <description>In February 2015, the United States Environmental Protection Agency (EPA) sponsored a workshop in Research Triangle Park, NC, USA to review the current state of the science one missions, air quality impacts, and health effects associated with exposures to ultrafine particles[1].[...].</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/42r1s37d</guid>
      <pubDate>Sun, 22 Oct 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Baldauf, Richard W</name>
      </author>
      <author>
        <name>Devlin, Robert B</name>
      </author>
      <author>
        <name>Gehr, Peter</name>
      </author>
      <author>
        <name>Giannelli, Robert</name>
      </author>
      <author>
        <name>Hassett-Sipple, Beth</name>
      </author>
      <author>
        <name>Jung, Heejung</name>
        <uri>https://orcid.org/0000-0003-0366-7284</uri>
      </author>
      <author>
        <name>Martini, Giorgio</name>
      </author>
      <author>
        <name>McDonald, Joseph</name>
      </author>
      <author>
        <name>Sacks, Jason D</name>
      </author>
      <author>
        <name>Walker, Katherine</name>
      </author>
    </item>
    <item>
      <title>Enhanced near infrared optical access to the brain with a transparent cranial implant and scalp optical clearing.</title>
      <link>https://escholarship.org/uc/item/2kn4c218</link>
      <description>We report on the enhanced optical transmittance in the NIR wavelength range (900 to 2400 nm) offered by a transparent Yttria-stabilized zirconia (YSZ) implant coupled with optical clearing agents (OCAs). The enhancement in optical access to the brain is evaluated upon comparing &lt;i&gt;ex-vivo&lt;/i&gt; transmittance measurements of mice native skull and the YSZ cranial implant with scalp and OCAs. An increase in transmittance of up to 50% and attenuation lengths of up to 2.4 mm (i.e., a five-fold increase in light penetration) are obtained with the YSZ implant and the OCAs. The use of this ceramic implant and the biocompatible optical clearing agents offer attractive features for NIR optical techniques for brain theranostics.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/2kn4c218</guid>
      <pubDate>Thu, 21 Sep 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Cano-Velázquez, Mildred S</name>
      </author>
      <author>
        <name>Davoodzadeh, Nami</name>
      </author>
      <author>
        <name>Halaney, David</name>
      </author>
      <author>
        <name>Jonak, Carrie R</name>
      </author>
      <author>
        <name>Binder, Devin K</name>
      </author>
      <author>
        <name>Hernández-Cordero, Juan</name>
      </author>
      <author>
        <name>Aguilar, Guillermo</name>
        <uri>https://orcid.org/0000-0001-7326-1162</uri>
      </author>
    </item>
    <item>
      <title>Mechanics of pulmonary airways: Linking structure to function through constitutive modeling, biochemistry, and histology</title>
      <link>https://escholarship.org/uc/item/18h0g99j</link>
      <description>Breathing involves fluid-solid interactions in the lung; however, the lack of experimental data inhibits combining the mechanics of air flow to airway deformation, challenging the understanding of how biomaterial constituents contribute to tissue response. As such, lung mechanics research is increasingly focused on exploring the relationship between structure and function. To address these needs, we characterize mechanical properties of porcine airways using uniaxial tensile experiments, accounting for bronchial orientation- and location- dependency. Structurally-reinforced constitutive models are developed to incorporate the role of collagen and elastin fibers embedded within the extrafibrillar matrix. The strain-energy function combines a matrix description (evaluating six models: compressible NeoHookean, unconstrained Ogden, uncoupled Mooney-Rivlin, incompressible Ogden, incompressible Demiray and incompressible NeoHookean), superimposed with non-linear fibers (evaluating two...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/18h0g99j</guid>
      <pubDate>Thu, 21 Sep 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Eskandari, Mona</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
      <author>
        <name>Nordgren, Tara M</name>
      </author>
      <author>
        <name>O'Connell, Grace D</name>
        <uri>https://orcid.org/0000-0003-0746-1638</uri>
      </author>
    </item>
    <item>
      <title>Evaluation of a transparent cranial implant as a permanent window for cerebral blood flow imaging.</title>
      <link>https://escholarship.org/uc/item/4tv4w7z7</link>
      <description>Laser speckle imaging (LSI) of mouse cerebral blood flow was compared through a transparent nanocrystalline yttria-stabilized zirconia (nc-YSZ) cranial implant over time (at days 0, 14, and 28, n = 3 mice), and vs. LSI through native skull (at day 60, n = 1 mouse). The average sharpness of imaged vessels was found to remain stable, with relative change in sharpness under 7.69% ± 1.2% over 28 days. Through-implant images of vessels at day 60 appeared sharper and smaller on average, with microvessels clearly visible, compared to through-skull images where vessels appeared blurred and distorted. These results suggest that long-term imaging through this implant is feasible.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/4tv4w7z7</guid>
      <pubDate>Wed, 20 Sep 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Davoodzadeh, Nami</name>
      </author>
      <author>
        <name>Cano-Velázquez, Mildred S</name>
      </author>
      <author>
        <name>Halaney, David L</name>
      </author>
      <author>
        <name>Jonak, Carrie R</name>
      </author>
      <author>
        <name>Binder, Devin K</name>
      </author>
      <author>
        <name>Aguilar, Guillermo</name>
        <uri>https://orcid.org/0000-0001-7326-1162</uri>
      </author>
    </item>
    <item>
      <title>Models of communication and control for brain networks: distinctions, convergence, and future outlook</title>
      <link>https://escholarship.org/uc/item/2dv8x1bt</link>
      <description>Recent advances in computational models of signal propagation and routing in the human brain have underscored the critical role of white-matter structure. A complementary approach has utilized the framework of network control theory to better understand how white matter constrains the manner in which a region or set of regions can direct or control the activity of other regions. Despite the potential for both of these approaches to enhance our understanding of the role of network structure in brain function, little work has sought to understand the relations between them. Here, we seek to explicitly bridge computational models of communication and principles of network control in a conceptual review of the current literature. By drawing comparisons between communication and control models in terms of the level of abstraction, the dynamical complexity, the dependence on network attributes, and the interplay of multiple spatiotemporal scales, we highlight the convergence of and...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/2dv8x1bt</guid>
      <pubDate>Thu, 31 Aug 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Srivastava, Pragya</name>
      </author>
      <author>
        <name>Nozari, Erfan</name>
        <uri>https://orcid.org/0000-0002-1981-8959</uri>
      </author>
      <author>
        <name>Kim, Jason Z</name>
      </author>
      <author>
        <name>Ju, Harang</name>
      </author>
      <author>
        <name>Zhou, Dale</name>
        <uri>https://orcid.org/0000-0001-9240-1327</uri>
      </author>
      <author>
        <name>Becker, Cassiano</name>
      </author>
      <author>
        <name>Pasqualetti, Fabio</name>
        <uri>https://orcid.org/0000-0002-8457-8656</uri>
      </author>
      <author>
        <name>Pappas, George J</name>
      </author>
      <author>
        <name>Bassett, Danielle S</name>
      </author>
    </item>
    <item>
      <title>Hydrous Ruthenium Oxide Nanoparticles Anchored to Graphene and Carbon Nanotube Hybrid Foam for Supercapacitors</title>
      <link>https://escholarship.org/uc/item/0q37c6rx</link>
      <description>In real life applications, supercapacitors (SCs) often can only be used as part of a hybrid system together with other high energy storage devices due to their relatively lower energy density in comparison to other types of energy storage devices such as batteries and fuel cells. Increasing the energy density of SCs will have a huge impact on the development of future energy storage devices by broadening the area of application for SCs. Here, we report a simple and scalable way of preparing a three-dimensional (3D) sub-5 nm hydrous ruthenium oxide (RuO2) anchored graphene and CNT hybrid foam (RGM) architecture for high-performance supercapacitor electrodes. This RGM architecture demonstrates a novel graphene foam conformally covered with hybrid networks of RuO2 nanoparticles and anchored CNTs. SCs based on RGM show superior gravimetric and per-area capacitive performance (specific capacitance: 502.78 F g−1, areal capacitance: 1.11 F cm−2) which leads to an exceptionally high energy...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0q37c6rx</guid>
      <pubDate>Fri, 21 Jul 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Wang, Wei</name>
        <uri>https://orcid.org/0000-0001-6587-8859</uri>
      </author>
      <author>
        <name>Guo, Shirui</name>
      </author>
      <author>
        <name>Lee, Ilkeun</name>
      </author>
      <author>
        <name>Ahmed, Kazi</name>
      </author>
      <author>
        <name>Zhong, Jiebin</name>
      </author>
      <author>
        <name>Favors, Zachary</name>
      </author>
      <author>
        <name>Zaera, Francisco</name>
        <uri>https://orcid.org/0000-0002-0128-7221</uri>
      </author>
      <author>
        <name>Ozkan, Mihrimah</name>
        <uri>https://orcid.org/0000-0002-6224-5703</uri>
      </author>
      <author>
        <name>Ozkan, Cengiz S</name>
        <uri>https://orcid.org/0000-0001-6751-6851</uri>
      </author>
    </item>
    <item>
      <title>Diseased and healthy murine local lung strains evaluated using digital image correlation</title>
      <link>https://escholarship.org/uc/item/6n23g61x</link>
      <description>Tissue remodeling in pulmonary disease irreversibly alters lung functionality and impacts quality of life. Mechanical ventilation is amongst the few pulmonary interventions to aid respiration, but can be harmful or fatal, inducing excessive regional (i.e., local) lung strains. Previous studies have advanced understanding of diseased global-level lung response under ventilation, but do not adequately capture the critical local-level response. Here, we pair a custom-designed pressure–volume ventilator with new applications of digital image correlation, to directly assess regional strains in the fibrosis-induced ex-vivo mouse lung, analyzed via regions of interest. We discuss differences between diseased and healthy lung mechanics, such as distensibility, heterogeneity, anisotropy, alveolar recruitment, and rate dependencies. Notably, we compare local and global compliance between diseased and healthy states by assessing the evolution of pressure-strain and pressure–volume curves...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/6n23g61x</guid>
      <pubDate>Fri, 14 Jul 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Nelson, TM</name>
      </author>
      <author>
        <name>Quiros, KAM</name>
      </author>
      <author>
        <name>Dominguez, EC</name>
      </author>
      <author>
        <name>Ulu, A</name>
      </author>
      <author>
        <name>Nordgren, TM</name>
      </author>
      <author>
        <name>Eskandari, M</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
    </item>
    <item>
      <title>Effects of Pulsed Radiofrequency Source on Cardiac Ablation</title>
      <link>https://escholarship.org/uc/item/0nv3x74b</link>
      <description>Heart arrhythmia is caused by abnormal electrical conduction through the myocardium, which in some cases, can be treated with heat. One of the challenges is to reduce temperature peaks-by still guaranteeing an efficient treatment where desired-to avoid any healthy tissue damage or any electrical issues within the device employed. A solution might be employing pulsed heat, in which thermal dose is given to the tissue with a variation in time. In this work, pulsed heat is used to modulate induced temperature fields during radiofrequency cardiac ablation. A three-dimensional model of the myocardium, catheter and blood flow is developed. Porous media, heat conduction and Navier-Stokes equations are, respectively, employed for each of the investigated domains. For the electric field, solved via Laplace equation, it is assumed that the electrode is at a fixed voltage. Pulsed heating effects are considered with a cosine time-variable pulsed function for the fixed voltage by constraining...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0nv3x74b</guid>
      <pubDate>Thu, 13 Jul 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Iasiello, Marcello</name>
      </author>
      <author>
        <name>Andreozzi, Assunta</name>
      </author>
      <author>
        <name>Bianco, Nicola</name>
      </author>
      <author>
        <name>Vafai, Kambiz</name>
        <uri>https://orcid.org/0000-0002-9720-3618</uri>
      </author>
    </item>
    <item>
      <title>Mutual spin-phonon driving effects and phonon eigenvector renormalization in nickel (II) oxide</title>
      <link>https://escholarship.org/uc/item/7f99j3vf</link>
      <description>The physics of mutual interaction of phonon quasiparticles with electronic spin degrees of freedom, leading to unusual transport phenomena of spin and heat, has been a subject of continuing interests for decades. Despite its pivotal role in transport processes, the effect of spin-phonon coupling on the phonon system, especially acoustic phonon properties, has so far been elusive. By means of inelastic neutron scattering and first-principles calculations, anomalous scattering spectral intensity from acoustic phonons was identified in the exemplary collinear antiferromagnetic nickel (II) oxide, unveiling strong spin-lattice correlations that renormalize the polarization of acoustic phonon. In particular, a clear magnetic scattering signature of the measured neutron scattering intensity from acoustic phonons is demonstrated by its momentum transfer and temperature dependences. The anomalous scattering intensity is successfully modeled with a modified magneto-vibrational scattering...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/7f99j3vf</guid>
      <pubDate>Mon, 3 Jul 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Sun, Qiyang</name>
      </author>
      <author>
        <name>Wei, Bin</name>
      </author>
      <author>
        <name>Su, Yaokun</name>
      </author>
      <author>
        <name>Smith, Hillary</name>
      </author>
      <author>
        <name>Lin, Jiao YY</name>
      </author>
      <author>
        <name>Abernathy, Douglas L</name>
      </author>
      <author>
        <name>Li, Chen</name>
        <uri>https://orcid.org/0000-0002-0758-5334</uri>
      </author>
    </item>
    <item>
      <title>Observations and parameterization of the effects of barrier height and source-to-barrier distance on concentrations downwind of a roadway</title>
      <link>https://escholarship.org/uc/item/1ds9g99k</link>
      <description>New results are presented from wind tunnel studies performed at the United States Environmental Protection Agency (U.S. EPA), which include cases with solid roadside barriers of varying heights and cases with varying distances between the line source (roadway) and a 6-m-tall barrier. The &lt;i&gt;Source-to-Barrier Distance&lt;/i&gt; cases include seven lanes of traffic with each lane acting as an independent source of continuous emissions along a line (i.e., line source). A mixed-wake algorithm that accounts for barrier effects within a steady-state air dispersion model was updated based on the recent wind tunnel studies. To study the effects of a solid roadside barrier, varying barrier heights and varying distances between the line source and barrier were modeled with the U.S. EPA regulatory air dispersion model AERMOD (v. 21112) using the line-source option that includes an experimental barrier option (RLINEXT). The mixed-wake algorithm reproduced the shape of the vertical concentration...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/1ds9g99k</guid>
      <pubDate>Thu, 29 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Francisco, Dianna M</name>
      </author>
      <author>
        <name>Heist, David K</name>
      </author>
      <author>
        <name>Venkatram, Akula</name>
      </author>
      <author>
        <name>Brouwer, Lydia H</name>
      </author>
      <author>
        <name>Perry, Steven G</name>
      </author>
    </item>
    <item>
      <title>Modeling turbulent transport of aerosols inside rooms using eddy diffusivity</title>
      <link>https://escholarship.org/uc/item/7zd1p292</link>
      <description>One major approach to modeling dispersion of pollutants inside confined spaces describes the turbulent transport of material as the product of an eddy diffusivity and the local concentration gradient. This paper examines the applicability of this eddy diffusivity/gradient model by (1) describing the conditions under which this approach is an appropriate representation of turbulent transport, and (2) re-analysis of data provided in studies that have successfully applied gradient transport to describe tracer concentrations. We find that the solutions of the mass conservation equation based on gradient transport provide adequate descriptions of concentration measurements from two studies representative of two types of sources: instantaneous and continuous release of aerosols. We then provide the rationale for the empirical success of the gradient transport model. The solutions of the gradient transport model allow us to examine the relationship between the ventilation rate and the...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/7zd1p292</guid>
      <pubDate>Fri, 23 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Venkatram, Akula</name>
        <uri>https://orcid.org/0000-0003-0544-1182</uri>
      </author>
      <author>
        <name>Weil, Jeffrey</name>
      </author>
    </item>
    <item>
      <title>An unrecognized inertial force induced by flow curvature in microfluidics</title>
      <link>https://escholarship.org/uc/item/7658g15x</link>
      <description>Modern inertial microfluidics routinely employs oscillatory flows around localized solid features or microbubbles for controlled, specific manipulation of particles, droplets, and cells. It is shown that theories of inertial effects that have been state of the art for decades miss major contributions and strongly underestimate forces on small suspended objects in a range of practically relevant conditions. An analytical approach is presented that derives a complete set of inertial forces and quantifies them in closed form as easy-to-use equations of motion, spanning the entire range from viscous to inviscid flows. The theory predicts additional attractive contributions toward oscillating boundaries, even for density-matched particles, a previously unexplained experimental observation. The accuracy of the theory is demonstrated against full-scale, three-dimensional direct numerical simulations throughout its range.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/7658g15x</guid>
      <pubDate>Fri, 23 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Agarwal, Siddhansh</name>
      </author>
      <author>
        <name>Chan, Fan Kiat</name>
      </author>
      <author>
        <name>Rallabandi, Bhargav</name>
        <uri>https://orcid.org/0000-0002-7733-8742</uri>
      </author>
      <author>
        <name>Gazzola, Mattia</name>
      </author>
      <author>
        <name>Hilgenfeldt, Sascha</name>
      </author>
    </item>
    <item>
      <title>Dispersion at the edges of near road noise barriers</title>
      <link>https://escholarship.org/uc/item/04k4f82m</link>
      <description>This paper presents an analysis of data from a wind tunnel study conducted to examine the dispersion of emissions at the edges of near-road noise barriers. The study is motivated by the concern that a barrier positioned downwind of a roadway may guide highly polluted plumes along the barrier leading to heightened concentrations as the plume spills around and downwind of the barrier end. The wind tunnel database consists of measurements of dispersion around a simulated roadway segment with various noise barrier configurations. Each roadway segment simulated in the wind tunnel had full-scale equivalent dimensions of 135 m long. Barrier segments, 135 m long with a height (&lt;i&gt;H&lt;/i&gt;) of 6 m, were located on the downwind side of the source at a distance of 18 m from it (measured perpendicularly from the line source). Examination of the concentration patterns associated with the cases indicates that 1) vertical mixing induced by barriers persists at crosswind distances up to the edge...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/04k4f82m</guid>
      <pubDate>Mon, 19 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Venkatram, Akula</name>
      </author>
      <author>
        <name>Heist, David K</name>
      </author>
      <author>
        <name>Perry, Steven G</name>
      </author>
      <author>
        <name>Brouwer, Lydia</name>
      </author>
    </item>
    <item>
      <title>Particle migration and sorting in microbubble streaming flows</title>
      <link>https://escholarship.org/uc/item/5s74f046</link>
      <description>Ultrasonic driving of semicylindrical microbubbles generates strong streaming flows that are robust over a wide range of driving frequencies. We show that in microchannels, these streaming flow patterns can be combined with Poiseuille flows to achieve two distinctive, highly tunable methods for size-sensitive sorting and trapping of particles much smaller than the bubble itself. This method allows higher throughput than typical passive sorting techniques, since it does not require the inclusion of device features on the order of the particle size. We propose a simple mechanism, based on channel and flow geometry, which reliably describes and predicts the sorting behavior observed in experiment. It is also shown that an asymptotic theory that incorporates the device geometry and superimposed channel flow accurately models key flow features such as peak speeds and particle trajectories, provided it is appropriately modified to account for 3D effects caused by the axial confinement...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5s74f046</guid>
      <pubDate>Thu, 8 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Thameem, Raqeeb</name>
      </author>
      <author>
        <name>Rallabandi, Bhargav</name>
        <uri>https://orcid.org/0000-0002-7733-8742</uri>
      </author>
      <author>
        <name>Hilgenfeldt, Sascha</name>
      </author>
    </item>
    <item>
      <title>Representative subsampling of sedimenting blood</title>
      <link>https://escholarship.org/uc/item/45g453tz</link>
      <description>It is often necessary to extract a small amount of a suspension, such as blood, from a larger sample of the same material for the purposes of diagnostics, testing or imaging. A practical challenge is that the cells in blood sediment noticeably on the time scale of a few minutes, making a representative subsampling of the original sample challenging. Guided by experimental data, we develop a Kynch sedimentation model to discuss design considerations that ensure a representative subsampling of blood, from a container of constant cross-sectional area, for the entire range of physiologically relevant hematocrit over a specified time of interest. Additionally, we show that this design may be modified to exploit the sedimentation and perform subsampling to achieve either higher or lower hematocrit relative to that of the original sample. Thus, our method provides a simple tool to either concentrate or dilute small quantities of blood or other sedimenting suspensions.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/45g453tz</guid>
      <pubDate>Thu, 8 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Rallabandi, Bhargav</name>
        <uri>https://orcid.org/0000-0002-7733-8742</uri>
      </author>
      <author>
        <name>Nunes, Janine K</name>
      </author>
      <author>
        <name>Perazzo, Antonio</name>
      </author>
      <author>
        <name>Gershtein, Sergey</name>
      </author>
      <author>
        <name>Stone, Howard A</name>
      </author>
    </item>
    <item>
      <title>Foam-driven fracture</title>
      <link>https://escholarship.org/uc/item/3b07t883</link>
      <description>In hydraulic fracturing, water is injected at high pressure to crack shale formations. More sustainable techniques use aqueous foams as injection fluids to reduce the water use and wastewater treatment of conventional hydrofractures. However, the physical mechanism of foam fracturing remains poorly understood, and this lack of understanding extends to other applications of compressible foams such as fire-fighting, energy storage, and enhanced oil recovery. Here we show that the injection of foam is much different from the injection of incompressible fluids and results in striking dynamics of fracture propagation that are tied to the compressibility of the foam. An understanding of bubble-scale dynamics is used to develop a model for macroscopic, compressible flow of the foam, from which a scaling law for the fracture length as a function of time is identified and exhibits excellent agreement with our experimental results.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/3b07t883</guid>
      <pubDate>Thu, 8 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Lai, Ching-Yao</name>
      </author>
      <author>
        <name>Rallabandi, Bhargav</name>
        <uri>https://orcid.org/0000-0002-7733-8742</uri>
      </author>
      <author>
        <name>Perazzo, Antonio</name>
      </author>
      <author>
        <name>Zheng, Zhong</name>
      </author>
      <author>
        <name>Smiddy, Samuel E</name>
      </author>
      <author>
        <name>Stone, Howard A</name>
      </author>
    </item>
    <item>
      <title>MEMS-Based Flexible Force Sensor for Tri-Axial Catheter Contact Force Measurement</title>
      <link>https://escholarship.org/uc/item/8bj4t6x5</link>
      <description>Atrial fibrillation (AFib) is a significant healthcare problem caused by the uneven and rapid discharge of electrical signals from pulmonary veins (PVs). The technique of radiofrequency (RF) ablation can block these abnormal electrical signals by ablating myocardial sleeves inside PVs. Catheter contact force measurement during RF ablation can reduce the rate of AFib recurrence, since it helps to determine effective contact of the catheter with the tissue, thereby resulting in effective power delivery for ablation. This paper presents the development of a three-dimensional (3D) force sensor to provide the real-time measurement of tri-axial catheter contact force. The 3D force sensor consists of a plastic cubic bead and five flexible force sensors. Each flexible force sensor was made of a PEDOT:PSS strain gauge and a PDMS bump on a flexible PDMS substrate. Calibration results show that the fabricated sensor has a linear response in the force range required for RF ablation. To evaluate...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/8bj4t6x5</guid>
      <pubDate>Fri, 2 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Pandya, Hardik J</name>
      </author>
      <author>
        <name>Sheng, Jun</name>
        <uri>https://orcid.org/0000-0001-8786-2137</uri>
      </author>
      <author>
        <name>Desai, Jaydev P</name>
      </author>
    </item>
    <item>
      <title>Massively-Parallelized, Deterministic Mechanoporation for Intracellular Delivery</title>
      <link>https://escholarship.org/uc/item/7h1195j3</link>
      <description>Microfluidic intracellular delivery approaches based on plasma membrane poration have shown promise for addressing the limitations of conventional cellular engineering techniques in a wide range of applications in biology and medicine. However, the inherent stochasticity of the poration process in many of these approaches often results in a trade-off between delivery efficiency and cellular viability, thus potentially limiting their utility. Herein, we present a novel microfluidic device concept that mitigates this trade-off by providing opportunity for deterministic mechanoporation (DMP) of cells en masse. This is achieved by the impingement of each cell upon a single needle-like penetrator during aspiration-based capture, followed by diffusive influx of exogenous cargo through the resulting membrane pore, once the cells are released by reversal of flow. Massive parallelization enables high throughput operation, while single-site poration allows for delivery of small and large-molecule...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/7h1195j3</guid>
      <pubDate>Fri, 2 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Dixit, Harish G</name>
      </author>
      <author>
        <name>Starr, Renate</name>
      </author>
      <author>
        <name>Dundon, Morgan L</name>
      </author>
      <author>
        <name>Pairs, Pranee I</name>
      </author>
      <author>
        <name>Yang, Xin</name>
      </author>
      <author>
        <name>Zhang, Yanyan</name>
      </author>
      <author>
        <name>Nampe, Daniel</name>
      </author>
      <author>
        <name>Ballas, Christopher B</name>
      </author>
      <author>
        <name>Tsutsui, Hideaki</name>
        <uri>https://orcid.org/0000-0002-2558-2639</uri>
      </author>
      <author>
        <name>Forman, Stephen J</name>
      </author>
      <author>
        <name>Brown, Christine E</name>
      </author>
      <author>
        <name>Rao, Masaru P</name>
        <uri>https://orcid.org/0000-0002-5939-6332</uri>
      </author>
    </item>
    <item>
      <title>Development of a Meso-Scale SMA-Based Torsion Actuator for Image-Guided Procedures</title>
      <link>https://escholarship.org/uc/item/4td3k0rd</link>
      <description>This paper presents the design, modeling, and control of a meso-scale torsion actuator based on shape memory alloy (SMA) for image-guided surgical procedures. Developing a miniature torsion actuator is challenging, but it opens the possibility of significantly enhancing the robot agility and maneuverability. The proposed torsion actuator is bi-directionally actuated by a pair of antagonistic SMA torsion springs through alternate Joule heating and natural cooling. The torsion actuator is integrated into a surgical robot prototype to demonstrate its working performance in the humid environment under C-Arm CT image guidance.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/4td3k0rd</guid>
      <pubDate>Fri, 2 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Sheng, Jun</name>
        <uri>https://orcid.org/0000-0001-8786-2137</uri>
      </author>
      <author>
        <name>Gandhi, Dheeraj</name>
      </author>
      <author>
        <name>Gullapalli, Rao</name>
      </author>
      <author>
        <name>Simard, J Marc</name>
      </author>
      <author>
        <name>Desai, Jaydev P</name>
      </author>
    </item>
    <item>
      <title>Towards the Development of a Steerable and MRI-Compatible Cardiac Catheter for Atrial Fibrillation Treatment</title>
      <link>https://escholarship.org/uc/item/4b67d87z</link>
      <description>To treat atrial fibrillation (AFib), radiofrequency ablation is usually implemented with a cardiac catheter to block abnormal electrical signals from pulmonary veins. However, it is challenging to manipulate a passive catheter. In addition, the radiation exposure to patients under fluoroscopic guidance has been a concern. To address these two major issues, this work presents the development of a steerable and MRI-compatible cardiac catheter by using shape memory alloy (SMA) as an alternative interventional tool for AFib. The developed cardiac catheter is comprised of a passive and flexible tubing and a steerable tip. The tip is composed of multiple bending modules and each module is actuated by a pair of antagonistic SMA wires. To improve the MRI-compatibility of SMA actuators, the electric current required for SMA actuation is significantly reduced by developing a technique of conductive heating actuation. In this paper, the design and fabrication of the cardiac catheter are...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/4b67d87z</guid>
      <pubDate>Fri, 2 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Sheng, Jun</name>
        <uri>https://orcid.org/0000-0001-8786-2137</uri>
      </author>
      <author>
        <name>Wang, Xuefeng</name>
      </author>
      <author>
        <name>Dickfeld, Timm-Michael L</name>
      </author>
      <author>
        <name>Desai, Jaydev P</name>
      </author>
    </item>
    <item>
      <title>Modular FBG Bending Sensor for Continuum Neurosurgical Robot</title>
      <link>https://escholarship.org/uc/item/13z0b711</link>
      <description>We present a modular sensing system to measure the deflection of a minimally invasive neurosurgical intracranial robot: MINIR-II. The MINIR-II robot is a tendon-driven continuum robot comprised of multiple spring backbone segments, which has been developed in our prior work. Due to the flexibility of the spring backbone and unique tendon routing configuration, each segment of MINIR-II can bend up to a large curvature (≥100 m&lt;sup&gt;-1&lt;/sup&gt;) in multiple directions. However, the shape measurement of the robot based on tendon displacement is not precise due to friction and unknown external load/disturbance. In this regard, we propose a bending sensor module comprised of a fiber Bragg grating (FBG) fiber, a Polydimethylsiloxane (PDMS) cylinder, and a superelastic spring. The grating segment of the FBG fiber is enclosed inside a PDMS cylinder (1 mm in diameter), and the PDMS cylinder is bonded with the superelastic spring in series. The deflection or bending of the robot backbone segment...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/13z0b711</guid>
      <pubDate>Fri, 2 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Rahman, Nahian</name>
      </author>
      <author>
        <name>Deaton, Nancy Joanna</name>
      </author>
      <author>
        <name>Sheng, Jun</name>
        <uri>https://orcid.org/0000-0001-8786-2137</uri>
      </author>
      <author>
        <name>Cheng, Shing Shin</name>
      </author>
      <author>
        <name>Desai, Jaydev P</name>
      </author>
    </item>
    <item>
      <title>A new bottom-up emissions estimation approach for aircraft sources in support of air quality modelling for community-scale assessments around airports</title>
      <link>https://escholarship.org/uc/item/98j9r13d</link>
      <description>Transportation infrastructure (including roadway traffic, ports, and airports) is critical to the nation's economy. With a growing economy, aircraft activity is expected to grow across the world. In the US, airport-related emissions, while generally small, are not an insignificant source of air pollution and related adverse health effects. However, currently there is a lack of tools that can easily be applied to study near-source pollution and explore the benefits of improvements to air quality and exposures. Screening-level air quality modelling is a useful tool for examining urban-scale air quality impacts of airport operations. Spatially-resolved aircraft emissions are needed for the screening-level modelling. In order to create spatially-resolved aircraft emissions, we developed a bottom-up emissions estimation methodology that includes data from a global chorded inventory dataset from the aviation environmental design tool (AEDT). The initial implementation of this method...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/98j9r13d</guid>
      <pubDate>Thu, 1 Jun 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Arunachalam, Saravanan</name>
      </author>
      <author>
        <name>Naess, Brian</name>
      </author>
      <author>
        <name>Seppanen, Catherine</name>
      </author>
      <author>
        <name>Valencia, Alejandro</name>
      </author>
      <author>
        <name>Brandmeyer, Jo Ellen</name>
      </author>
      <author>
        <name>Venkatram, Akula</name>
      </author>
      <author>
        <name>Weil, Jeffrey</name>
      </author>
      <author>
        <name>Isakov, Vlad</name>
      </author>
      <author>
        <name>Barzyk, Timothy</name>
      </author>
    </item>
    <item>
      <title>Using Low-Cost Air Quality Sensor Networks to Improve the Spatial and Temporal Resolution of Concentration Maps</title>
      <link>https://escholarship.org/uc/item/0909x9m9</link>
      <description>We present an approach to analyzing fine particulate matter (PM&lt;sub&gt;2.5&lt;/sub&gt;) data from a network of "low cost air quality monitors" (LCAQM) to obtain a finely resolved concentration map. In the approach, based on a dispersion model, we first identify the probable locations of the sources, and then estimate the magnitudes of the emissions from these sources by fitting model estimates of concentrations to corresponding measurements. The emissions are then used to estimate concentrations on a grid covering the domain of interest. The residuals between model estimates at the monitor locations and the measured concentrations are then interpolated to the grid points using Kriging. We illustrate this approach by applying it to a network of 20 LCAQMs located in the Imperial Valley of Southern California. Estimating the underlying mean concentration field with a dispersion model provides a more realistic estimate of the spatial distribution of PM&lt;sub&gt;2.5&lt;/sub&gt; concentrations than that...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0909x9m9</guid>
      <pubDate>Sat, 27 May 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Ahangar, Faraz Enayati</name>
      </author>
      <author>
        <name>Freedman, Frank R</name>
      </author>
      <author>
        <name>Venkatram, Akula</name>
      </author>
    </item>
    <item>
      <title>Elastosis during airway wall remodeling explains multiple co-existing instability patterns</title>
      <link>https://escholarship.org/uc/item/7ng8g4d9</link>
      <description>Living structures can undergo morphological changes in response to growth and alterations in microstructural properties in response to remodeling. From a biological perspective, airway wall inflammation and airway elastosis are classical hallmarks of growth and remodeling during chronic lung disease. From a mechanical point of view, growth and remodeling trigger mechanical instabilities that result in inward folding and airway obstruction. While previous analytical and computational studies have focused on identifying the critical parameters at the onset of folding, few have considered the post-buckling behavior. All prior studies assume constant microstructural properties during the folding process; yet, clinical studies now reveal progressive airway elastosis, the degeneration of elastic fibers associated with a gradual stiffening of the inner layer. Here, we explore the influence of temporally evolving material properties on the post-bifurcation behavior of the airway wall....</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/7ng8g4d9</guid>
      <pubDate>Sat, 20 May 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Eskandari, Mona</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
      <author>
        <name>Javili, Ali</name>
      </author>
      <author>
        <name>Kuhl, Ellen</name>
      </author>
    </item>
    <item>
      <title>Patient-Specific Airway Wall Remodeling in Chronic Lung Disease</title>
      <link>https://escholarship.org/uc/item/26s2v982</link>
      <description>Chronic lung disease affects more than a quarter of the adult population; yet, the mechanics of the airways are poorly understood. The pathophysiology of chronic lung disease is commonly characterized by mucosal growth and smooth muscle contraction of the airways, which initiate an inward folding of the mucosal layer and progressive airflow obstruction. Since the degree of obstruction is closely correlated with the number of folds, mucosal folding has been extensively studied in idealized circular cross sections. However, airflow obstruction has never been studied in real airway geometries; the behavior of imperfect, non-cylindrical, continuously branching airways remains unknown. Here we model the effects of chronic lung disease using the nonlinear field theories of mechanics supplemented by the theory of finite growth. We perform finite element analysis of patient-specific Y-branch segments created from magnetic resonance images. We demonstrate that the mucosal folding pattern...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/26s2v982</guid>
      <pubDate>Sat, 20 May 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Eskandari, Mona</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
      <author>
        <name>Kuschner, Ware G</name>
      </author>
      <author>
        <name>Kuhl, Ellen</name>
      </author>
    </item>
    <item>
      <title>Systems biology and mechanics of growth</title>
      <link>https://escholarship.org/uc/item/00q0x8cn</link>
      <description>In contrast to inert systems, living biological systems have the advantage to adapt to their environment through growth and evolution. This transfiguration is evident during embryonic development, when the predisposed need to grow allows form to follow function. Alterations in the equilibrium state of biological systems breed disease and mutation in response to environmental triggers. The need to characterize the growth of biological systems to better understand these phenomena has motivated the continuum theory of growth and stimulated the development of computational tools in systems biology. Biological growth in development and disease is increasingly studied using the framework of morphoelasticity. Here, we demonstrate the potential for morphoelastic simulations through examples of volume, area, and length growth, inspired by tumor expansion, chronic bronchitis, brain development, intestine formation, plant shape, and myopia. We review the systems biology of living systems...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/00q0x8cn</guid>
      <pubDate>Sat, 20 May 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Eskandari, Mona</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
      <author>
        <name>Kuhl, Ellen</name>
      </author>
    </item>
    <item>
      <title>White Matter Network Architecture Guides Direct Electrical Stimulation through Optimal State Transitions</title>
      <link>https://escholarship.org/uc/item/9tw377g4</link>
      <description>Optimizing direct electrical stimulation for the treatment of neurological disease remains difficult due to an incomplete understanding of its physical propagation through brain tissue. Here, we use network control theory to predict how stimulation spreads through white matter to influence spatially distributed dynamics. We test the theory's predictions using a unique dataset comprising diffusion weighted imaging and electrocorticography in epilepsy patients undergoing grid stimulation. We find statistically significant shared variance between the predicted activity state transitions and the observed activity state transitions. We then use an optimal control framework to posit testable hypotheses regarding which brain states and structural properties will efficiently improve memory encoding when stimulated. Our work quantifies the role that white matter architecture plays in guiding the dynamics of direct electrical stimulation and offers empirical support for the utility of network...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9tw377g4</guid>
      <pubDate>Fri, 19 May 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Stiso, Jennifer</name>
      </author>
      <author>
        <name>Khambhati, Ankit N</name>
        <uri>https://orcid.org/0000-0001-6182-4677</uri>
      </author>
      <author>
        <name>Menara, Tommaso</name>
      </author>
      <author>
        <name>Kahn, Ari E</name>
      </author>
      <author>
        <name>Stein, Joel M</name>
      </author>
      <author>
        <name>Das, Sandihitsu R</name>
      </author>
      <author>
        <name>Gorniak, Richard</name>
      </author>
      <author>
        <name>Tracy, Joseph</name>
      </author>
      <author>
        <name>Litt, Brian</name>
      </author>
      <author>
        <name>Davis, Kathryn A</name>
      </author>
      <author>
        <name>Pasqualetti, Fabio</name>
        <uri>https://orcid.org/0000-0002-8457-8656</uri>
      </author>
      <author>
        <name>Lucas, Timothy H</name>
      </author>
      <author>
        <name>Bassett, Danielle S</name>
      </author>
    </item>
    <item>
      <title>Nuclear quantum effect with pure anharmonicity and the anomalous thermal expansion of silicon</title>
      <link>https://escholarship.org/uc/item/576542c2</link>
      <description>Despite the widespread use of silicon in modern technology, its peculiar thermal expansion is not well understood. Adapting harmonic phonons to the specific volume at temperature, the quasiharmonic approximation, has become accepted for simulating the thermal expansion, but has given ambiguous interpretations for microscopic mechanisms. To test atomistic mechanisms, we performed inelastic neutron scattering experiments from 100 K to 1,500 K on a single crystal of silicon to measure the changes in phonon frequencies. Our state-of-the-art ab initio calculations, which fully account for phonon anharmonicity and nuclear quantum effects, reproduced the measured shifts of individual phonons with temperature, whereas quasiharmonic shifts were mostly of the wrong sign. Surprisingly, the accepted quasiharmonic model was found to predict the thermal expansion owing to a large cancellation of contributions from individual phonons.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/576542c2</guid>
      <pubDate>Thu, 18 May 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Kim, DS</name>
      </author>
      <author>
        <name>Hellman, O</name>
      </author>
      <author>
        <name>Herriman, J</name>
      </author>
      <author>
        <name>Smith, HL</name>
      </author>
      <author>
        <name>Lin, JYY</name>
      </author>
      <author>
        <name>Shulumba, N</name>
      </author>
      <author>
        <name>Niedziela, JL</name>
      </author>
      <author>
        <name>Li, CW</name>
        <uri>https://orcid.org/0000-0002-0758-5334</uri>
      </author>
      <author>
        <name>Abernathy, DL</name>
      </author>
      <author>
        <name>Fultz, B</name>
      </author>
    </item>
    <item>
      <title>Evaluation and development of tools to quantify the impacts of roadside vegetation barriers on near-road air quality.</title>
      <link>https://escholarship.org/uc/item/9mp246g6</link>
      <description>Traffic emissions are associated with the elevation of health risks of people living close to highways. Roadside vegetation barriers have the potential of reducing these risks by decreasing near-road air pollution concentrations. However, while we understand the mechanisms that determine the mitigation caused by solid barriers, we still have questions about how vegetative barriers affect dispersion. The US EPA conducted several field experiments to understand the effects of vegetation barriers on dispersion of pollutants near roadways (e.g., 2008 North Carolina study and 2014 California study) that indicate the reduction of near-road pollutant concentrations can be up to 30% due to the barrier effects. The results of these field studies are being used to develop and evaluate dispersion models that account for the effects of near-road vegetative barriers. These models can be used for evaluating the effectiveness of vegetation barriers as a potential mitigation strategy to reduce...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9mp246g6</guid>
      <pubDate>Wed, 17 May 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Isakov, Vlad</name>
      </author>
      <author>
        <name>Venkatram, Akula</name>
        <uri>https://orcid.org/0000-0003-0544-1182</uri>
      </author>
      <author>
        <name>Baldauf, Richard</name>
      </author>
      <author>
        <name>Deshmukh, Parikshit</name>
      </author>
      <author>
        <name>Zhang, Max</name>
      </author>
    </item>
    <item>
      <title>Using Adhesive Patterning to Construct 3D Paper Microfluidic Devices.</title>
      <link>https://escholarship.org/uc/item/16d654jj</link>
      <description>We demonstrate the use of patterned aerosol adhesives to construct both planar and nonplanar 3D paper microfluidic devices. By spraying an aerosol adhesive through a metal stencil, the overall amount of adhesive used in assembling paper microfluidic devices can be significantly reduced. We show on a simple 4-layer planar paper microfluidic device that the optimal adhesive application technique and device construction style depends heavily on desired performance characteristics. By moderately increasing the overall area of a device, it is possible to dramatically decrease the wicking time and increase device success rates while also reducing the amount of adhesive required to keep the device together. Such adhesive application also causes the adhesive to form semi-permanent bonds instead of permanent bonds between paper layers, enabling single-use devices to be non-destructively disassembled after use. Nonplanar 3D origami devices also benefit from the semi-permanent bonds during...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/16d654jj</guid>
      <pubDate>Wed, 3 May 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Kalish, Brent</name>
      </author>
      <author>
        <name>Tsutsui, Hideaki</name>
        <uri>https://orcid.org/0000-0002-2558-2639</uri>
      </author>
    </item>
    <item>
      <title>Micro- and Nanopatterned Topographical Cues for Regulating Macrophage Cell Shape and Phenotype</title>
      <link>https://escholarship.org/uc/item/00r7p436</link>
      <description>Controlling the interactions between macrophages and biomaterials is critical for modulating the response to implants. While it has long been thought that biomaterial surface chemistry regulates the immune response, recent studies have suggested that material geometry may in fact dominate. Our previous work demonstrated that elongation of macrophages regulates their polarization toward a pro-healing phenotype. In this work, we elucidate how surface topology might be leveraged to alter macrophage cell morphology and polarization state. Using a deep etch technique, we fabricated titanium surfaces containing micro- and nanopatterned grooves, which have been previously shown to promote cell elongation. Morphology, phenotypic markers, and cytokine secretion of murine bone marrow derived macrophages on different groove widths were analyzed. The results suggest that micro- and nanopatterned grooves influenced macrophage elongation, which peaked on substrates with 400-500 nm wide grooves....</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/00r7p436</guid>
      <pubDate>Fri, 28 Apr 2023 00:00:00 +0000</pubDate>
      <author>
        <name>Luu, Thuy U</name>
      </author>
      <author>
        <name>Gott, Shannon C</name>
      </author>
      <author>
        <name>Woo, Bryan WK</name>
      </author>
      <author>
        <name>Rao, Masaru P</name>
        <uri>https://orcid.org/0000-0002-5939-6332</uri>
      </author>
      <author>
        <name>Liu, Wendy F</name>
        <uri>https://orcid.org/0000-0002-8904-7643</uri>
      </author>
    </item>
    <item>
      <title>A critical dislocation velocity for serration mechanism transition in a nickel-chromium solid solution alloy</title>
      <link>https://escholarship.org/uc/item/9tj8z1nk</link>
      <description>The influence of strain rate across three orders of magnitude (1.70&amp;nbsp;×&amp;nbsp;10−5/s to 1.43&amp;nbsp;×&amp;nbsp;10−2/s) along with the effect of the plastic strain accumulation (up to 10%) on the serrated plastic flow were investigated in the nickel-chromium (Ni-Cr) solid solution alloy Nimonic 75 by performing constant-strain-rate tension testing at 600&amp;nbsp;°C. As the strain rate decreased, the critical strain for the onset of serrations transitioned from normal behavior to inverse behavior. The serrated flow was characterized as Type A+B serration at high strain rate (1.43&amp;nbsp;×&amp;nbsp;10−2/s). In the intermediate strain-rate regime (1.43&amp;nbsp;×&amp;nbsp;10−3/s and 1.45&amp;nbsp;×&amp;nbsp;10−4/s), Type B serrations were observed and followed by a transformation to Type C+B serrations. At the low strain rate (1.70&amp;nbsp;×&amp;nbsp;10−5/s), the plastic flow immediately displayed Type C serrations, which later evolved into Type C+B serrations. Regardless of the strain rate, plastic strain, or dislocation...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9tj8z1nk</guid>
      <pubDate>Wed, 7 Dec 2022 00:00:00 +0000</pubDate>
      <author>
        <name>Qin, Yu</name>
      </author>
      <author>
        <name>Greaney, P Alex</name>
        <uri>https://orcid.org/0000-0002-4252-6022</uri>
      </author>
      <author>
        <name>Evans, T Matthew</name>
      </author>
      <author>
        <name>Kruzic, Jamie J</name>
      </author>
    </item>
    <item>
      <title>Properties for Thermally Conductive Interfaces with Wide Band Gap Materials</title>
      <link>https://escholarship.org/uc/item/5ws9g0gt</link>
      <description>The goal of this study is to determine how bulk vibrational properties and interfacial structure affect thermal transport at interfaces in wide band gap semiconductor systems. Time-domain thermoreflectance measurements of thermal conductance &lt;i&gt;G&lt;/i&gt; are reported for interfaces between nitride metals and group IV (diamond, SiC, Si, and Ge) and group III-V (AlN, GaN, and cubic BN) materials. Group IV and group III-V semiconductors have systematic differences in vibrational properties. Similarly, HfN and TiN are also vibrationally distinct from each other. Therefore, comparing &lt;i&gt;G&lt;/i&gt; of interfaces formed from these materials provides a systematic test of how vibrational similarity between two materials affects interfacial transport. For HfN interfaces, we observe conductances between 140 and 300 MW m&lt;sup&gt;-2&lt;/sup&gt; K&lt;sup&gt;-1&lt;/sup&gt;, whereas conductances between 200 and 800 MW m&lt;sup&gt;-2&lt;/sup&gt; K&lt;sup&gt;-1&lt;/sup&gt; are observed for TiN interfaces. TiN forms exceptionally conductive interfaces...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5ws9g0gt</guid>
      <pubDate>Wed, 19 Oct 2022 00:00:00 +0000</pubDate>
      <author>
        <name>Khan, Samreen</name>
      </author>
      <author>
        <name>Angeles, Frank</name>
      </author>
      <author>
        <name>Wright, John</name>
      </author>
      <author>
        <name>Vishwakarma, Saurabh</name>
      </author>
      <author>
        <name>Ortiz, Victor H</name>
      </author>
      <author>
        <name>Guzman, Erick</name>
      </author>
      <author>
        <name>Kargar, Fariborz</name>
      </author>
      <author>
        <name>Balandin, Alexander A</name>
        <uri>https://orcid.org/0000-0002-9944-7894</uri>
      </author>
      <author>
        <name>Smith, David J</name>
      </author>
      <author>
        <name>Jena, Debdeep</name>
      </author>
      <author>
        <name>Xing, H Grace</name>
      </author>
      <author>
        <name>Wilson, Richard</name>
        <uri>https://orcid.org/0000-0002-8219-9679</uri>
      </author>
    </item>
    <item>
      <title>Novel Survivin Peptides Screened With Computer Algorithm Induce Cytotoxic T Lymphocytes With Higher Cytotoxic Efficiency to Cancer Cells</title>
      <link>https://escholarship.org/uc/item/7hr2k7hs</link>
      <description>The identification of novel biomarkers and therapeutic targets in advanced cancer is critical for improving cancer diagnosis and therapeutics. Survivin (SV) is highly expressed predominantly in most cancer cells and tissues but is absent or undetectable in terminally differentiated normal adult tissues. Therefore, it functions as an almost universal tumor antigen. Peptides are short chains of amino acids linked by peptide bonds. To obtain novel SV decamers that are able to induce SV-specific cytotoxic T lymphocytes (CTLs) with a higher cytotoxic efficiency against cancer cells, major histocompatibility complex (MHC) peptide binding algorithms were conducted to predict nine modified SV&lt;sub&gt;95&lt;/sub&gt; decamers (from SV&lt;sub&gt;95-2&lt;/sub&gt; to SV&lt;sub&gt;95-10&lt;/sub&gt;) based on the natural SV&lt;sub&gt;95-104&lt;/sub&gt; peptide sequence of ELTLGEFLKL (here defined as SV&lt;sub&gt;95-1&lt;/sub&gt;). The fluorescent density of each SV&lt;sub&gt;95&lt;/sub&gt; peptide was determined by a MHC stability assay, followed by the generation...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/7hr2k7hs</guid>
      <pubDate>Sat, 1 Oct 2022 00:00:00 +0000</pubDate>
      <author>
        <name>Chen, Qiuqiang</name>
      </author>
      <author>
        <name>Jia, Gang</name>
      </author>
      <author>
        <name>Zhao, Xiaolei</name>
      </author>
      <author>
        <name>Bao, Ying</name>
      </author>
      <author>
        <name>Zhang, Yu</name>
      </author>
      <author>
        <name>Ozkan, Cengiz</name>
        <uri>https://orcid.org/0000-0001-6751-6851</uri>
      </author>
      <author>
        <name>Minev, Boris</name>
      </author>
      <author>
        <name>Ma, Wenxue</name>
        <uri>https://orcid.org/0000-0001-9228-6162</uri>
      </author>
    </item>
    <item>
      <title>Mouse lung mechanical properties under varying inflation volumes and cycling frequencies</title>
      <link>https://escholarship.org/uc/item/5hs4n1xt</link>
      <description>Respiratory pathologies alter the structure of the lung and impact its mechanics. Mice are widely used in the study of lung pathologies, but there is a lack of fundamental mechanical measurements assessing the interdependent effect of varying inflation volumes and cycling frequency. In this study, the mechanical properties of five male C57BL/6J mice (29–33&amp;nbsp;weeks of age) lungs were evaluated ex vivo using our custom-designed electromechanical, continuous measure ventilation apparatus. We comprehensively quantify and analyze the effect of loading volumes (0.3, 0.5, 0.7, 0.9&amp;nbsp;ml) and breathing rates (5, 10, 20 breaths per minute) on pulmonary inflation and deflation mechanical properties. We report means of static compliance between 5.4–16.1&amp;nbsp;µl/cmH2O, deflation compliance of 5.3–22.2&amp;nbsp;µl/cmH2O, percent relaxation of 21.7–39.1%, hysteresis of 1.11–7.6&amp;nbsp;ml•cmH2O, and energy loss of 39–58%&amp;nbsp;for the range of four volumes and three rates tested, along with additional...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5hs4n1xt</guid>
      <pubDate>Sat, 23 Jul 2022 00:00:00 +0000</pubDate>
      <author>
        <name>Quiros, KAM</name>
      </author>
      <author>
        <name>Nelson, TM</name>
      </author>
      <author>
        <name>Sattari, S</name>
      </author>
      <author>
        <name>Mariano, CA</name>
      </author>
      <author>
        <name>Ulu, A</name>
      </author>
      <author>
        <name>Dominguez, EC</name>
      </author>
      <author>
        <name>Nordgren, TM</name>
      </author>
      <author>
        <name>Eskandari, M</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
    </item>
    <item>
      <title>Examining lung mechanical strains as influenced by breathing volumes and rates using experimental digital image correlation</title>
      <link>https://escholarship.org/uc/item/5pp5j79d</link>
      <description>BackgroundMechanical ventilation is often employed to facilitate breathing in patients suffering from respiratory illnesses and disabilities. Despite the benefits, there are risks associated with ventilator-induced lung injuries and death, driving investigations for alternative ventilation techniques to improve mechanical ventilation, such as multi-oscillatory and high-frequency ventilation; however, few studies have evaluated fundamental lung mechanical local deformations under variable loading.MethodsPorcine whole lung samples were analyzed using a novel application of digital image correlation interfaced with an electromechanical ventilation system to associate the local behavior to the global volume and pressure loading in response to various inflation volumes and breathing rates.&amp;nbsp;Strains, anisotropy, tissue compliance, and the evolutionary response of the inflating lung were analyzed.ResultsExperiments demonstrated a direct and near one-to-one linear relationship between...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5pp5j79d</guid>
      <pubDate>Fri, 22 Jul 2022 00:00:00 +0000</pubDate>
      <author>
        <name>Mariano, CA</name>
      </author>
      <author>
        <name>Sattari, S</name>
      </author>
      <author>
        <name>Quiros, KAM</name>
      </author>
      <author>
        <name>Nelson, TM</name>
      </author>
      <author>
        <name>Eskandari, M</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
    </item>
    <item>
      <title>Isotopic Signatures of Methane Emissions From Dairy Farms in California’s San Joaquin Valley</title>
      <link>https://escholarship.org/uc/item/0pq9p5jk</link>
      <description>Abstract  In this study, we present seasonal atmospheric measurements of δ 13 C CH4 from dairy farms in the San Joaquin Valley of California. We used δ 13 C CH4 to characterize emissions from enteric fermentation by measuring downwind of cattle housing (e.g., freestall barns, corrals) and from manure management areas (e.g., anaerobic manure lagoons) with a mobile platform equipped with cavity ring‐down spectrometers. Across seasons, the δ 13 C CH4 from enteric fermentation source areas ranged from −69.7&amp;nbsp;±&amp;nbsp;0.6&amp;nbsp;per&amp;nbsp;mil&amp;nbsp;(‰) to −51.6&amp;nbsp;±&amp;nbsp;0.1‰ while the δ 13 C CH4 from manure lagoons ranged from −49.5&amp;nbsp;±&amp;nbsp;0.1‰ to −40.5&amp;nbsp;±&amp;nbsp;0.2‰. Measurements of δ 13 C CH4 of enteric CH 4 suggest a greater than 10‰ difference between cattle production groups in accordance with diet. Isotopic signatures of CH 4 were used to characterize enteric and manure CH 4 from downwind plume sampling of dairies. Our findings show that δ 13 C CH4 measurements could...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0pq9p5jk</guid>
      <pubDate>Thu, 3 Feb 2022 00:00:00 +0000</pubDate>
      <author>
        <name>Carranza, Valerie</name>
      </author>
      <author>
        <name>Biggs, Brenna</name>
      </author>
      <author>
        <name>Meyer, Deanne</name>
      </author>
      <author>
        <name>Townsend‐Small, Amy</name>
      </author>
      <author>
        <name>Thiruvenkatachari, Ranga Rajan</name>
      </author>
      <author>
        <name>Venkatram, Akula</name>
        <uri>https://orcid.org/0000-0003-0544-1182</uri>
      </author>
      <author>
        <name>Fischer, Marc L</name>
      </author>
      <author>
        <name>Hopkins, Francesca M</name>
        <uri>https://orcid.org/0000-0002-6110-7675</uri>
      </author>
    </item>
    <item>
      <title>Spin–orbit torque switching of a ferromagnet with picosecond electrical pulses</title>
      <link>https://escholarship.org/uc/item/99c6g91m</link>
      <description>The development of approaches that can efficiently control the magnetization of magnetic materials is central to the creation of fast and low-power spintronic devices. Spin transfer torque can be used to electrically manipulate magnetic order in devices, but is typically limited to nanosecond timescales. Alternatively, spin–orbit torque can be employed, and switching with current pulses down to ~200 ps has been demonstrated. However, the upper limit to magnetization switching speed remains unestablished. Here, we show that photoconductive switches can be used to apply 6-ps-wide electrical pulses and deterministically switch the out-of-plane magnetization of a common thin cobalt film via spin–orbit torque. We probe the ultrafast magnetization dynamics due to spin–orbit torques with sub-picosecond resolution using the time-resolved magneto-optical Kerr effect (MOKE). We also estimate that the magnetization switching consumes less than 50 pJ in micrometre-sized devices.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/99c6g91m</guid>
      <pubDate>Wed, 26 Jan 2022 00:00:00 +0000</pubDate>
      <author>
        <name>Jhuria, Kaushalya</name>
      </author>
      <author>
        <name>Hohlfeld, Julius</name>
      </author>
      <author>
        <name>Pattabi, Akshay</name>
      </author>
      <author>
        <name>Martin, Elodie</name>
      </author>
      <author>
        <name>Arriola Córdova, Aldo Ygnacio</name>
      </author>
      <author>
        <name>Shi, Xinping</name>
      </author>
      <author>
        <name>Lo Conte, Roberto</name>
      </author>
      <author>
        <name>Petit-Watelot, Sebastien</name>
      </author>
      <author>
        <name>Rojas-Sanchez, Juan Carlos</name>
      </author>
      <author>
        <name>Malinowski, Gregory</name>
      </author>
      <author>
        <name>Mangin, Stéphane</name>
      </author>
      <author>
        <name>Lemaître, Aristide</name>
      </author>
      <author>
        <name>Hehn, Michel</name>
      </author>
      <author>
        <name>Bokor, Jeffrey</name>
        <uri>https://orcid.org/0000-0002-4541-0156</uri>
      </author>
      <author>
        <name>Wilson, Richard B</name>
        <uri>https://orcid.org/0000-0002-8219-9679</uri>
      </author>
      <author>
        <name>Gorchon, Jon</name>
      </author>
    </item>
    <item>
      <title>Observation of Magnon Polarons in a Uniaxial Antiferromagnetic Insulator</title>
      <link>https://escholarship.org/uc/item/53d2q8s4</link>
      <description>Magnon polarons, a type of hybridized excitations between magnons and phonons, were first reported in yttrium iron garnet as anomalies in the spin Seebeck effect responses. Here, we report an observation of antiferromagnetic (AFM) magnon polarons in a uniaxial AFM insulator Cr_{2}O_{3}. Despite the relatively higher energy of magnon than that of the acoustic phonons, near the spin-flop transition of ∼6  T, the left-handed magnon spectrum shifts downward to hybridize with the acoustic phonons to form AFM magnon polarons, which can also be probed by the spin Seebeck effect. The spin Seebeck signal is founded to be enhanced due to the magnon polarons at low temperatures.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/53d2q8s4</guid>
      <pubDate>Sun, 31 Oct 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Li, Junxue</name>
      </author>
      <author>
        <name>Simensen, Haakon T</name>
      </author>
      <author>
        <name>Reitz, Derek</name>
      </author>
      <author>
        <name>Sun, Qiyang</name>
      </author>
      <author>
        <name>Yuan, Wei</name>
      </author>
      <author>
        <name>Li, Chen</name>
        <uri>https://orcid.org/0000-0002-0758-5334</uri>
      </author>
      <author>
        <name>Tserkovnyak, Yaroslav</name>
      </author>
      <author>
        <name>Brataas, Arne</name>
      </author>
      <author>
        <name>Shi, Jing</name>
        <uri>https://orcid.org/0000-0002-9395-8482</uri>
      </author>
    </item>
    <item>
      <title>Unifying femtosecond and picosecond single-pulse magnetic switching in Gd-Fe-Co</title>
      <link>https://escholarship.org/uc/item/9jv060zb</link>
      <description>Many questions are still open regarding the physical mechanisms behind the magnetic switching in Gd-Fe-Co alloys by single optical pulses. Phenomenological models suggest a femtosecond scale exchange relaxation between sublattice magnetization as the driving mechanism for switching. The recent observation of thermally induced switching in Gd-Fe-Co by using both several picosecond optical laser pulse as well as electric current pulses has questioned this previous understanding. This has raised the question of whether or not the same switching mechanics are acting at the femtosecond and picosecond scales. In this work, we aim at filling this gap in the understanding of the switching mechanisms behind thermal single-pulse switching. To that end, we have studied experimentally thermal single-pulse switching in Gd-Fe-Co alloys, for a wide range of system parameters, such as composition, laser power, and pulse duration. We provide a quantitative description of the switching dynamics...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9jv060zb</guid>
      <pubDate>Mon, 27 Sep 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Jakobs, F</name>
      </author>
      <author>
        <name>Ostler, TA</name>
      </author>
      <author>
        <name>Lambert, C-H</name>
      </author>
      <author>
        <name>Yang, Y</name>
      </author>
      <author>
        <name>Salahuddin, S</name>
      </author>
      <author>
        <name>Wilson, RB</name>
        <uri>https://orcid.org/0000-0002-8219-9679</uri>
      </author>
      <author>
        <name>Gorchon, J</name>
      </author>
      <author>
        <name>Bokor, J</name>
        <uri>https://orcid.org/0000-0002-4541-0156</uri>
      </author>
      <author>
        <name>Atxitia, U</name>
      </author>
    </item>
    <item>
      <title>In-Situ Imaging of Molten High-Entropy Alloys Using Cold Neutrons</title>
      <link>https://escholarship.org/uc/item/1fm9z9j8</link>
      <description>Real-time neutron imaging was utilized to produce a movie-like series of radiographs for in-situ observation of the remixing of liquid state immiscibility that occurs in equiatomic CoCrCu with the addition of Ni. A previous neutron imaging study demonstrated that liquid state immiscibility can be observed in-situ for the equiatomic CoCrCu alloy. In this follow-up study, equiatomic buttons of CoCrCu were placed alongside small Ni buttons inside an alumina crucible in a high-temperature vacuum furnace. The mass of the Ni buttons was specifically selected such that when melted in the same crucible as the CoCrCu buttons, the overall composition would become equiatomic CoCrCuNi. Neutron imaging was simultaneously carried out to capture 10 radiographs in 20 °C steps from 1000 °C to 1500 °C and back down to 1000 °C. This, in turn, produced a movie-like series of radiographs that allow for the observation of the buttons melting, the transition from immiscible to miscible as Ni is alloyed...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/1fm9z9j8</guid>
      <pubDate>Mon, 20 Sep 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Derimow, Nicholas</name>
      </author>
      <author>
        <name>Santodonato, Louis J</name>
      </author>
      <author>
        <name>MacDonald, Benjamin E</name>
      </author>
      <author>
        <name>Le, Bryan</name>
      </author>
      <author>
        <name>Lavernia, Enrique J</name>
      </author>
      <author>
        <name>Abbaschian, Reza</name>
        <uri>https://orcid.org/0000-0003-3437-2059</uri>
      </author>
    </item>
    <item>
      <title>Group Refractive Index of Nanocrystalline Yttria-Stabilized Zirconia Transparent Cranial Implants</title>
      <link>https://escholarship.org/uc/item/027570d3</link>
      <description>Transparent "Window to the Brain" (WttB) cranial implants made from a biocompatible ceramic, nanocrystalline Yttria-Stabilized Zirconia (nc-YSZ), were recently reported. These reports demonstrated chronic brain imaging across the implants in mice using optical coherence tomography (OCT) and laser speckle imaging. However, optical properties of these transparent cranial implants are neither completely characterized nor completely understood. In this study, we measure optical properties of the implant using a swept source OCT system with a spectral range of 136 nm centered at 1,300 nm to characterize the group refractive index of the nc-YSZ window, over a narrow range of temperatures at which the implant may be used during imaging or therapy (20-43°C). Group refractive index was found to be 2.1-2.2 for OCT imaging over this temperature range. Chromatic dispersion for this spectral range was observed to vary over the sample, sometimes flipping signs between normal and anomalous dispersion....</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/027570d3</guid>
      <pubDate>Mon, 7 Jun 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Halaney, David L</name>
      </author>
      <author>
        <name>Katta, Nitesh</name>
        <uri>https://orcid.org/0000-0001-8097-5489</uri>
      </author>
      <author>
        <name>Fallah, Hamidreza</name>
      </author>
      <author>
        <name>Aguilar, Guillermo</name>
        <uri>https://orcid.org/0000-0001-7326-1162</uri>
      </author>
      <author>
        <name>Milner, Thomas E</name>
        <uri>https://orcid.org/0000-0002-7532-0004</uri>
      </author>
    </item>
    <item>
      <title>Bidirectional triplet exciton transfer between silicon nanocrystals and perylene</title>
      <link>https://escholarship.org/uc/item/5mm4g6qx</link>
      <description>Hybrid materials comprised of inorganic quantum dots functionalized with small-molecule organic chromophores have emerged as promising materials for reshaping light's energy content. Quantum dots in these structures can serve as light harvesting antennas that absorb photons and pass their energy to molecules bound to their surface in the form of spin-triplet excitons. Energy passed in this manner can fuel upconversion schemes that use triplet fusion to convert infrared light into visible emission. Likewise, triplet excitons passed in the opposite direction, from molecules to quantum dots, can enable solar cells that use singlet fission to circumvent the Shockley-Queisser limit. Silicon QDs represent a key target for these hybrid materials due to silicon's biocompatibility and preeminence within the solar energy market. However, while triplet transfer from silicon QDs to molecules has been observed, no reports to date have shown evidence of energy moving in the reverse direction....</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5mm4g6qx</guid>
      <pubDate>Mon, 31 May 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Huang, Tingting</name>
      </author>
      <author>
        <name>Koh, Timothy T</name>
      </author>
      <author>
        <name>Schwan, Joseph</name>
      </author>
      <author>
        <name>Tran, Tiffany T-T</name>
      </author>
      <author>
        <name>Xia, Pan</name>
      </author>
      <author>
        <name>Wang, Kefu</name>
      </author>
      <author>
        <name>Mangolini, Lorenzo</name>
        <uri>https://orcid.org/0000-0002-0057-2450</uri>
      </author>
      <author>
        <name>Tang, Ming L</name>
        <uri>https://orcid.org/0000-0002-7642-2598</uri>
      </author>
      <author>
        <name>Roberts, Sean T</name>
      </author>
    </item>
    <item>
      <title>Hierarchical nickel valence gradient stabilizes high-nickel content layered cathode materials</title>
      <link>https://escholarship.org/uc/item/9qc386z2</link>
      <description>High-nickel content cathode materials offer high energy density. However, the structural and surface instability may cause poor capacity retention and thermal stability of them. To circumvent this problem, nickel concentration-gradient materials have been developed to enhance high-nickel content cathode materials’ thermal and cycling stability. Even though promising, the fundamental mechanism of the&amp;nbsp;nickel concentration gradient’s stabilization effect remains elusive because it is inseparable from nickel’s valence gradient effect. To isolate nickel’s valence gradient effect and understand its fundamental stabilization mechanism, we design and synthesize a LiNi0.8Mn0.1Co0.1O2 material that is compositionally uniform and has a hierarchical valence gradient. The nickel valence gradient material shows superior cycling and thermal stability than the conventional one. The result suggests creating an oxidation state gradient that hides the more capacitive but less stable Ni3+ away...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9qc386z2</guid>
      <pubDate>Mon, 24 May 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Lin, Ruoqian</name>
        <uri>https://orcid.org/0000-0003-3907-2231</uri>
      </author>
      <author>
        <name>Bak, Seong-Min</name>
      </author>
      <author>
        <name>Shin, Youngho</name>
      </author>
      <author>
        <name>Zhang, Rui</name>
      </author>
      <author>
        <name>Wang, Chunyang</name>
      </author>
      <author>
        <name>Kisslinger, Kim</name>
      </author>
      <author>
        <name>Ge, Mingyuan</name>
      </author>
      <author>
        <name>Huang, Xiaojing</name>
      </author>
      <author>
        <name>Shadike, Zulipiya</name>
      </author>
      <author>
        <name>Pattammattel, Ajith</name>
      </author>
      <author>
        <name>Yan, Hanfei</name>
      </author>
      <author>
        <name>Chu, Yong</name>
      </author>
      <author>
        <name>Wu, Jinpeng</name>
      </author>
      <author>
        <name>Yang, Wanli</name>
        <uri>https://orcid.org/0000-0003-0666-8063</uri>
      </author>
      <author>
        <name>Whittingham, M Stanley</name>
      </author>
      <author>
        <name>Xin, Huolin L</name>
      </author>
      <author>
        <name>Yang, Xiao-Qing</name>
      </author>
    </item>
    <item>
      <title>Heterostructured materials: superior properties from hetero-zone interaction</title>
      <link>https://escholarship.org/uc/item/0481538f</link>
      <description>Heterostructured materials are an emerging class of materials with superior performances that are unattainable by their conventional homogeneous counterparts. They consist of heterogeneous zones with dramatic (&amp;gt;100%) variations in mechanical and/or physical properties. The interaction in these hetero-zones produces a synergistic effect where the integrated property exceeds the prediction by the rule-of-mixtures. The heterostructured materials field explores heterostructures to control defect distributions, long-range internal stresses, and nonlinear inter-zone interactions for unprecedented performances. This paper is aimed to provide perspectives on this novel field, describe the state-of-the-art of heterostructured materials, and identify and discuss key issues that deserve additional studies. IMPACT STATEMENT This paper delineates heterostructured materials, which are emerging as a new class of materials with unprecedented properties, new materials science and economic industrial...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0481538f</guid>
      <pubDate>Tue, 4 May 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Zhu, Yuntian</name>
      </author>
      <author>
        <name>Ameyama, Kei</name>
      </author>
      <author>
        <name>Anderson, Peter M</name>
      </author>
      <author>
        <name>Beyerlein, Irene J</name>
      </author>
      <author>
        <name>Gao, Huajian</name>
      </author>
      <author>
        <name>Kim, Hyoung Seop</name>
      </author>
      <author>
        <name>Lavernia, Enrique</name>
      </author>
      <author>
        <name>Mathaudhu, Suveen</name>
      </author>
      <author>
        <name>Mughrabi, Hael</name>
      </author>
      <author>
        <name>Ritchie, Robert O</name>
        <uri>https://orcid.org/0000-0002-0501-6998</uri>
      </author>
      <author>
        <name>Tsuji, Nobuhiro</name>
      </author>
      <author>
        <name>Zhang, Xiangyi</name>
      </author>
      <author>
        <name>Wu, Xiaolei</name>
      </author>
    </item>
    <item>
      <title>TEMImageNet training library and AtomSegNet deep-learning models for high-precision atom segmentation, localization, denoising, and deblurring of atomic-resolution images</title>
      <link>https://escholarship.org/uc/item/8qj260h7</link>
      <description>Atom segmentation and localization, noise reduction and deblurring of atomic-resolution scanning transmission electron microscopy (STEM) images with high precision and robustness is a challenging task. Although several conventional algorithms, such has thresholding, edge detection and clustering, can achieve reasonable performance in some predefined sceneries, they tend to fail when interferences from the background are strong and unpredictable. Particularly, for atomic-resolution STEM images, so far there is no well-established algorithm that is robust enough to segment or detect all atomic columns when there is large thickness variation in a recorded image. Herein, we report the development of a training library and a deep learning method that can perform robust and precise atom segmentation, localization, denoising, and super-resolution processing of experimental images. Despite using simulated images as training datasets, the deep-learning model can self-adapt to experimental...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/8qj260h7</guid>
      <pubDate>Mon, 29 Mar 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Lin, Ruoqian</name>
        <uri>https://orcid.org/0000-0003-3907-2231</uri>
      </author>
      <author>
        <name>Zhang, Rui</name>
      </author>
      <author>
        <name>Wang, Chunyang</name>
      </author>
      <author>
        <name>Yang, Xiao-Qing</name>
      </author>
      <author>
        <name>Xin, Huolin L</name>
      </author>
    </item>
    <item>
      <title>Emerging Technologies for Monitoring Plant Health in Vivo</title>
      <link>https://escholarship.org/uc/item/0cv8k3cg</link>
      <description>In the coming decades, increasing agricultural productivity is all-important. As the global population is growing rapidly and putting increased demand on food supply, poor soil quality, drought, flooding, increasing temperatures, and novel plant diseases are negatively impacting yields worldwide. One method to increase yields is plant health monitoring and rapid detection of disease, nutrient deficiencies, or drought. Monitoring plant health will allow for precise application of agrichemicals, fertilizers, and water in order to maximize yields. In vivo plant sensors are an emerging technology with the potential to increase agricultural productivity. In this mini-review, we discuss three major approaches of in vivo sensors for plant health monitoring, including genetic engineering, imaging and spectroscopy, and electrical.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0cv8k3cg</guid>
      <pubDate>Mon, 22 Mar 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Roper, Jenna M</name>
      </author>
      <author>
        <name>Garcia, Jose F</name>
      </author>
      <author>
        <name>Tsutsui, Hideaki</name>
        <uri>https://orcid.org/0000-0002-2558-2639</uri>
      </author>
    </item>
    <item>
      <title>Liquid Phase Separation in High-Entropy Alloys—A Review</title>
      <link>https://escholarship.org/uc/item/2k81q16f</link>
      <description>It has been 14 years since the discovery of the high-entropy alloys (HEAs), an idea of alloying which has reinvigorated materials scientists to explore unconventional alloy compositions and multicomponent alloy systems. Many authors have referred to these alloys as multi-principal element alloys (MPEAs) or complex concentrated alloys (CCAs) in order to place less restrictions on what constitutes an HEA. Regardless of classification, the research is rooted in the exploration of structure-properties and processing relations in these multicomponent alloys with the aim to surpass the physical properties of conventional materials. More recent studies show that some of these alloys undergo liquid phase separation, a phenomenon largely dictated by low entropy of mixing and positive mixing enthalpy. Studies posit that positive mixing enthalpy of the binary and ternary components contribute substantially to the formation of liquid miscibility gaps. The objective of this review is to bring...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/2k81q16f</guid>
      <pubDate>Tue, 5 Jan 2021 00:00:00 +0000</pubDate>
      <author>
        <name>Derimow, Nicholas</name>
      </author>
      <author>
        <name>Abbaschian, Reza</name>
        <uri>https://orcid.org/0000-0003-3437-2059</uri>
      </author>
    </item>
    <item>
      <title>A disordered rock salt anode for fast-charging lithium-ion batteries</title>
      <link>https://escholarship.org/uc/item/4wx6k32j</link>
      <description>Rechargeable lithium-ion batteries with high energy density that can be safely charged and discharged at high rates are desirable for electrified transportation and other applications1–3. However, the sub-optimal intercalation potentials of current anodes result in a trade-off between energy density, power and safety. Here we report that disordered rock salt4,5 Li3+xV2O5 can be used as a fast-charging anode that can reversibly cycle two lithium ions at an average voltage of about 0.6 volts versus a Li/Li+ reference electrode. The increased potential compared to graphite6,7 reduces the likelihood of lithium metal plating if proper charging controls are used, alleviating a major safety concern (short-circuiting related to Li dendrite growth). In addition, a lithium-ion battery with a disordered rock salt Li3V2O5 anode yields a cell voltage much higher than does a battery using a commercial fast-charging lithium titanate anode or other intercalation anode candidates (Li3VO4 and LiV0.5Ti0.5S2)8,9....</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/4wx6k32j</guid>
      <pubDate>Mon, 14 Dec 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Liu, Haodong</name>
      </author>
      <author>
        <name>Zhu, Zhuoying</name>
        <uri>https://orcid.org/0000-0003-1775-7651</uri>
      </author>
      <author>
        <name>Yan, Qizhang</name>
      </author>
      <author>
        <name>Yu, Sicen</name>
      </author>
      <author>
        <name>He, Xin</name>
        <uri>https://orcid.org/0000-0002-0272-9079</uri>
      </author>
      <author>
        <name>Chen, Yan</name>
      </author>
      <author>
        <name>Zhang, Rui</name>
      </author>
      <author>
        <name>Ma, Lu</name>
      </author>
      <author>
        <name>Liu, Tongchao</name>
      </author>
      <author>
        <name>Li, Matthew</name>
      </author>
      <author>
        <name>Lin, Ruoqian</name>
        <uri>https://orcid.org/0000-0003-3907-2231</uri>
      </author>
      <author>
        <name>Chen, Yiming</name>
      </author>
      <author>
        <name>Li, Yejing</name>
      </author>
      <author>
        <name>Xing, Xing</name>
      </author>
      <author>
        <name>Choi, Yoonjung</name>
      </author>
      <author>
        <name>Gao, Lucy</name>
      </author>
      <author>
        <name>Cho, Helen Sung-yun</name>
      </author>
      <author>
        <name>An, Ke</name>
      </author>
      <author>
        <name>Feng, Jun</name>
      </author>
      <author>
        <name>Kostecki, Robert</name>
        <uri>https://orcid.org/0000-0002-4014-8232</uri>
      </author>
      <author>
        <name>Amine, Khalil</name>
      </author>
      <author>
        <name>Wu, Tianpin</name>
      </author>
      <author>
        <name>Lu, Jun</name>
      </author>
      <author>
        <name>Xin, Huolin L</name>
      </author>
      <author>
        <name>Ong, Shyue Ping</name>
        <uri>https://orcid.org/0000-0001-5726-2587</uri>
      </author>
      <author>
        <name>Liu, Ping</name>
        <uri>https://orcid.org/0000-0002-1488-1668</uri>
      </author>
    </item>
    <item>
      <title>Modifying Wicking Speeds in Paper-Based Microfluidic Devices by Laser-Etching</title>
      <link>https://escholarship.org/uc/item/69r523dv</link>
      <description>Paper-based microfluidic devices are an attractive platform for developing low-cost, point-of-care diagnostic tools. As paper-based devices' detection chemistries become more complex, more complicated devices are required, often entailing the sequential delivery of different liquids or reagents to reaction zones. Most research into flow control has been focused on introducing delays. However, delaying the flow can be problematic due to increased evaporation leading to sample loss. We report the use of a CO&lt;sub&gt;2&lt;/sub&gt; laser to uniformly etch the surface of the paper to modify wicking speeds in paper-based microfluidic devices. This technique can produce both wicking speed increases of up to 1.1× faster and decreases of up to 0.9× slower. Wicking speeds can be further enhanced by etching both sides of the paper, resulting in wicking 1.3× faster than unetched channels. Channels with lengthwise laser-etched grooves were also compared to uniformly etched channels, with the most heavily...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/69r523dv</guid>
      <pubDate>Mon, 14 Sep 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Kalish, Brent</name>
      </author>
      <author>
        <name>Tan, Mick Kyle</name>
      </author>
      <author>
        <name>Tsutsui, Hideaki</name>
        <uri>https://orcid.org/0000-0002-2558-2639</uri>
      </author>
    </item>
    <item>
      <title>Comparison of GW band structure to semiempirical approach for an FeSe monolayer</title>
      <link>https://escholarship.org/uc/item/0n89h3kv</link>
      <description>We present the G0W0 band structure, core levels, and deformation potential of monolayer FeSe in the paramagnetic phase based on a starting mean field of the Kohn-Sham density functional theory (DFT) with the Perdew, Burke, and Ernzerhof functional. We find the GW correction increases the bandwidth of the states forming the M pocket near the Fermi energy, while leaving the Γ pocket roughly unchanged. We then compare the G0W0 quasiparticle band energies with the band structure from a simple empirical +A approach, which was recently proposed to capture the renormalization of the electron-phonon interaction going beyond DFT in FeSe, when used as a starting point in density functional perturbation theory. We show that this empirical correction succeeds in approximating the GW nonlocal and dynamical self-energy in monolayer FeSe and reproduces the GW band structure near the Fermi surface, the core energy levels, and the deformation potential (electron-phonon coupling).</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0n89h3kv</guid>
      <pubDate>Tue, 28 Jul 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Qiu, Diana Y</name>
      </author>
      <author>
        <name>Coh, Sinisa</name>
        <uri>https://orcid.org/0000-0002-2331-4008</uri>
      </author>
      <author>
        <name>Cohen, Marvin L</name>
      </author>
      <author>
        <name>Louie, Steven G</name>
      </author>
    </item>
    <item>
      <title>Chronic Brain Imaging Across a Transparent Nanocrystalline Yttria-Stabilized-Zirconia Cranial Implant</title>
      <link>https://escholarship.org/uc/item/3f33t5dn</link>
      <description>Repeated non-diffuse optical imaging of the brain is difficult. This is due to the fact that the cranial bone is highly scattering and thus a strong optical barrier. Repeated craniotomies increase the risk of complications and may disrupt the biological systems being imaged. We previously introduced a potential solution in the form of a transparent ceramic cranial implant called the Window to the Brain (WttB) implant. This implant is made of nanocrystalline Yttria-Stabilized Zirconia (nc-YSZ), which possesses the requisite mechanical strength to serve as a permanent optical access window in human patients. In this present study, we demonstrate repeated brain imaging of &lt;i&gt;n&lt;/i&gt; = 5 mice using both OCT and LSI across the WttB implant over 4 weeks. The main objectives are to determine if the WttB implant allows for chronic OCT imaging, and to shed further light on the question of whether optical access provided by the WttB implant remains stable over this duration in the body. The...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/3f33t5dn</guid>
      <pubDate>Mon, 27 Jul 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Halaney, David L</name>
      </author>
      <author>
        <name>Jonak, Carrie R</name>
      </author>
      <author>
        <name>Liu, Junze</name>
      </author>
      <author>
        <name>Davoodzadeh, Nami</name>
      </author>
      <author>
        <name>Cano-Velázquez, Mildred S</name>
      </author>
      <author>
        <name>Ehtiyatkar, Pasha</name>
      </author>
      <author>
        <name>Park, Hyle</name>
      </author>
      <author>
        <name>Binder, Devin K</name>
      </author>
      <author>
        <name>Aguilar, Guillermo</name>
        <uri>https://orcid.org/0000-0001-7326-1162</uri>
      </author>
    </item>
    <item>
      <title>Distance and Microsphere Aggregation-Based DNA Detection in a Paper-Based Microfluidic Device</title>
      <link>https://escholarship.org/uc/item/4d29w2c2</link>
      <description>In paper-based microfluidics, the simplest devices are colorimetric, giving qualitative results. However, getting quantitative data can be quite a bit more difficult. Distance-based devices provide a user-friendly means of obtaining quantitative data without the need for any additional equipment, simply by using an included ruler or calibrated markings. This article details the development of a quantitative DNA detection device that utilizes the aggregation of polystyrene microspheres to affect the distance that microspheres wick through filter paper. The microspheres are conjugated to single-stranded DNA (ssDNA) oligomers that are partially complementary to a target strand and, in the presence of the target strand, form a three-strand complex, resulting in the formation of aggregates. The higher the concentration of the target strand, the larger the aggregate, and the shorter the distance wicked by the microspheres. This behavior was investigated across a wide range of target...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/4d29w2c2</guid>
      <pubDate>Mon, 22 Jun 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Kalish, Brent</name>
      </author>
      <author>
        <name>Zhang, Jianhou</name>
      </author>
      <author>
        <name>Edema, Hilary</name>
      </author>
      <author>
        <name>Luong, James</name>
      </author>
      <author>
        <name>Roper, Jenna</name>
      </author>
      <author>
        <name>Beaudette, Chad</name>
      </author>
      <author>
        <name>Echodu, Richard</name>
      </author>
      <author>
        <name>Tsutsui, Hideaki</name>
        <uri>https://orcid.org/0000-0002-2558-2639</uri>
      </author>
    </item>
    <item>
      <title>Controllability of structural brain networks</title>
      <link>https://escholarship.org/uc/item/32b3m67s</link>
      <description>Cognitive function is driven by dynamic interactions between large-scale neural circuits or networks, enabling behaviour. However, fundamental principles constraining these dynamic network processes have remained elusive. Here we use tools from control and network theories to offer a mechanistic explanation for how the brain moves between cognitive states drawn from the network organization of white matter microstructure. Our results suggest that densely connected areas, particularly in the default mode system, facilitate the movement of the brain to many easily reachable states. Weakly connected areas, particularly in cognitive control systems, facilitate the movement of the brain to difficult-to-reach states. Areas located on the boundary between network communities, particularly in attentional control systems, facilitate the integration or segregation of diverse cognitive systems. Our results suggest that structural network differences between cognitive circuits dictate their...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/32b3m67s</guid>
      <pubDate>Thu, 21 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Gu, Shi</name>
      </author>
      <author>
        <name>Pasqualetti, Fabio</name>
        <uri>https://orcid.org/0000-0002-8457-8656</uri>
      </author>
      <author>
        <name>Cieslak, Matthew</name>
      </author>
      <author>
        <name>Telesford, Qawi K</name>
      </author>
      <author>
        <name>Yu, Alfred B</name>
      </author>
      <author>
        <name>Kahn, Ari E</name>
      </author>
      <author>
        <name>Medaglia, John D</name>
      </author>
      <author>
        <name>Vettel, Jean M</name>
      </author>
      <author>
        <name>Miller, Michael B</name>
      </author>
      <author>
        <name>Grafton, Scott T</name>
      </author>
      <author>
        <name>Bassett, Danielle S</name>
      </author>
    </item>
    <item>
      <title>Stimulation-Based Control of Dynamic Brain Networks</title>
      <link>https://escholarship.org/uc/item/9zr7526p</link>
      <description>The ability to modulate brain states using targeted stimulation is increasingly being employed to treat neurological disorders and to enhance human performance. Despite the growing interest in brain stimulation as a form of neuromodulation, much remains unknown about the network-level impact of these focal perturbations. To study the system wide impact of regional stimulation, we employ a data-driven computational model of nonlinear brain dynamics to systematically explore the effects of targeted stimulation. Validating predictions from network control theory, we uncover the relationship between regional controllability and the focal versus global impact of stimulation, and we relate these findings to differences in the underlying network architecture. Finally, by mapping brain regions to cognitive systems, we observe that the default mode system imparts large global change despite being highly constrained by structural connectivity. This work forms an important step towards the...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9zr7526p</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Muldoon, Sarah Feldt</name>
      </author>
      <author>
        <name>Pasqualetti, Fabio</name>
        <uri>https://orcid.org/0000-0002-8457-8656</uri>
      </author>
      <author>
        <name>Gu, Shi</name>
      </author>
      <author>
        <name>Cieslak, Matthew</name>
      </author>
      <author>
        <name>Grafton, Scott T</name>
      </author>
      <author>
        <name>Vettel, Jean M</name>
      </author>
      <author>
        <name>Bassett, Danielle S</name>
      </author>
    </item>
    <item>
      <title>Analysis of Deflection Enhancement Using Epsilon Assembly Microcantilevers Based Sensors</title>
      <link>https://escholarship.org/uc/item/9dv5h1pt</link>
      <description>The present work analyzes theoretically and verifies the advantage of utilizing ɛ-microcantilever assemblies in microsensing applications. The deflection profile of these innovative ɛ-assembly microcantilevers is compared with that of the rectangular microcantilever and modified triangular microcantlever. Various force-loading conditions are considered. The theorem of linear elasticity for thin beams is used to obtain the deflections. The obtained defections are validated against an accurate numerical solution utilizing finite element method with maximum deviation less than 10 percent. It is found that the ɛ-assembly produces larger deflections than the rectangular microcantilever under the same base surface stress and same extension length. In addition, the ɛ-microcantilever assembly is found to produce larger deflection than the modified triangular microcantilever. This deflection enhancement is found to increase as the ɛ-assembly's free length decreases for various types of...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9dv5h1pt</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Khaled, Abdul-Rahim A</name>
      </author>
      <author>
        <name>Vafai, Kambiz</name>
        <uri>https://orcid.org/0000-0002-9720-3618</uri>
      </author>
    </item>
    <item>
      <title>Polydiacetylene-coated polyvinylidene fluoride strip aptasensor for colorimetric detection of zinc(II)</title>
      <link>https://escholarship.org/uc/item/9dp2w067</link>
      <description>We report a new polydiacetylene (PDA) sensor strip for simple visual detection of zinc ions in aqueous solution. The specificity of this sensor comes from Zn&lt;sup&gt;2+&lt;/sup&gt; DNA aptamer probes conjugated onto PDA. Effects of aptamer length and structure on the sensitivity of PDA's color transition were first investigated. PDA conjugated with the optimal aptamer sequence was then coated onto a strip of polyvinylidene fluoride membrane and photopolymerized by UV exposure. The newly developed sensor successfully exhibited a blue-to-red chromatic change in a semi-quantitative manner in response to zinc ions. No discernable change was observed in solutions containing other common ions. Advantages of this sensor include its ease of fabrication, high specificity, and equipment-free detection, all of which are desirable for in-field applications and use in resource-limited settings.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9dp2w067</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Wen, Jessica T</name>
      </author>
      <author>
        <name>Bohorquez, Karen</name>
      </author>
      <author>
        <name>Tsutsui, Hideaki</name>
        <uri>https://orcid.org/0000-0002-2558-2639</uri>
      </author>
    </item>
    <item>
      <title>Unraveling the Role of Interfaces on the Spall Failure of Cu/Ta Multilayered Systems</title>
      <link>https://escholarship.org/uc/item/90d905tt</link>
      <description>Molecular dynamics (MD) simulations are carried out to investigate the effects of the type and spacing of FCC/BCC interfaces on the deformation and spall behavior. The simulations are carried out using model Cu/Ta multilayers with six different types of interfaces. The results suggest that interface type can significantly affect the structure and intensity of the incoming shock wave, change the activated slip systems, alter dislocation slip and twinning behavior, affect where and how voids are nucleated during spallation and the resulting spall strength. Moreover, the above aspects are significantly affected by the interface spacing. A transition from homogeneous to heterogeneous dislocation nucleation occurs as the interface spacing is decreased to 6 nm. Depending on interface type and spacing, damage (voids) nucleation and spall failure is observed to occur not only at the Cu/Ta interfaces, but also in the weaker Cu layer interior, or even in the stronger Ta layer interior,...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/90d905tt</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Chen, Jie</name>
      </author>
      <author>
        <name>Mathaudhu, Suveen N</name>
      </author>
      <author>
        <name>Thadhani, Naresh</name>
      </author>
      <author>
        <name>Dongare, Avinash M</name>
      </author>
    </item>
    <item>
      <title>Robust penetrating microelectrodes for neural interfaces realized by titanium micromachining</title>
      <link>https://escholarship.org/uc/item/7c33b79j</link>
      <description>Neural prosthetic interfaces based upon penetrating microelectrode devices have broadened our understanding of the brain and have shown promise for restoring neurological functions lost to disease, stroke, or injury. However, the eventual viability of such devices for use in the treatment of neurological dysfunction may be ultimately constrained by the intrinsic brittleness of silicon, the material most commonly used for manufacture of penetrating microelectrodes. This brittleness creates predisposition for catastrophic fracture, which may adversely affect the reliability and safety of such devices, due to potential for fragmentation within the brain. Herein, we report the development of titanium-based penetrating microelectrodes that seek to address this potential future limitation. Titanium provides advantage relative to silicon due to its superior fracture toughness, which affords potential for creation of robust devices that are resistant to catastrophic failure. Realization...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/7c33b79j</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>McCarthy, Patrick T</name>
      </author>
      <author>
        <name>Otto, Kevin J</name>
      </author>
      <author>
        <name>Rao, Masaru P</name>
        <uri>https://orcid.org/0000-0002-5939-6332</uri>
      </author>
    </item>
    <item>
      <title>Exocytosis-coordinated mechanisms for tip growth underlie pollen tube growth guidance</title>
      <link>https://escholarship.org/uc/item/6z54j0qx</link>
      <description>Many tip-growing cells are capable of responding to guidance cues, during which cells precisely steer their growth toward the source of guidance signals. Though several players in signal perception have been identified, little is known about the downstream signaling that controls growth direction during guidance. Here, using combined modeling and experimental studies, we demonstrate that the growth guidance of Arabidopsis pollen tubes is regulated by the signaling network that controls tip growth. Tip-localized exocytosis plays a key role in this network by integrating guidance signals with the ROP1 Rho GTPase signaling and coordinating intracellular signaling with cell wall mechanics. This model reproduces the high robustness and responsiveness of pollen tube guidance and explains the connection between guidance efficiency and the parameters of the tip growth system. Hence, our findings establish an exocytosis-coordinated mechanism underlying the cellular pathfinding guided by...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/6z54j0qx</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Luo, Nan</name>
      </author>
      <author>
        <name>Yan, An</name>
      </author>
      <author>
        <name>Liu, Gang</name>
      </author>
      <author>
        <name>Guo, Jingzhe</name>
      </author>
      <author>
        <name>Rong, Duoyan</name>
      </author>
      <author>
        <name>Kanaoka, Masahiro M</name>
      </author>
      <author>
        <name>Xiao, Zhen</name>
      </author>
      <author>
        <name>Xu, Guanshui</name>
        <uri>https://orcid.org/0000-0001-8060-7942</uri>
      </author>
      <author>
        <name>Higashiyama, Tetsuya</name>
      </author>
      <author>
        <name>Cui, Xinping</name>
        <uri>https://orcid.org/0000-0002-1420-2696</uri>
      </author>
      <author>
        <name>Yang, Zhenbiao</name>
      </author>
    </item>
    <item>
      <title>Reversible intercalation of methyl viologen as a dicationic charge carrier in aqueous batteries</title>
      <link>https://escholarship.org/uc/item/5hx584w6</link>
      <description>The interactions between charge carriers and electrode structures represent one of the most important considerations in the search for new energy storage devices. Currently, ionic bonding dominates the battery chemistry. Here we report the reversible insertion of a large molecular dication, methyl viologen, into the crystal structure of an aromatic solid electrode, 3,4,9,10-perylenetetracarboxylic dianhydride. This is the largest insertion charge carrier when non-solvated ever reported for batteries; surprisingly, the kinetic properties of the (de)insertion of methyl viologen are&amp;nbsp;excellent with 60% of capacity retained when the current rate is increased from 100 mA g−1 to 2000 mA g−1. Characterization reveals that the insertion of methyl viologen causes phase transformation of the organic host, and embodies guest-host chemical bonding. First-principles density functional theory calculations suggest strong guest-host interaction beyond the pure ionic bonding, where a large...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5hx584w6</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Wei, Zhixuan</name>
      </author>
      <author>
        <name>Shin, Woochul</name>
      </author>
      <author>
        <name>Jiang, Heng</name>
      </author>
      <author>
        <name>Wu, Xianyong</name>
      </author>
      <author>
        <name>Stickle, William F</name>
      </author>
      <author>
        <name>Chen, Gang</name>
      </author>
      <author>
        <name>Lu, Jun</name>
      </author>
      <author>
        <name>Alex Greaney, P</name>
      </author>
      <author>
        <name>Du, Fei</name>
      </author>
      <author>
        <name>Ji, Xiulei</name>
      </author>
    </item>
    <item>
      <title>Laser-Assisted Cryosurgery in ex vivo Mice Hepatic Tissue: Viability Assays Using Green Fluorescent Protein</title>
      <link>https://escholarship.org/uc/item/5c12k1mb</link>
      <description>An experimental investigation is carried out to develop a novel approach to cryosurgery, where laser heating counteracts tissue freezing to better confine damage to the targeted cancerous tissue within a lethal low-temperature isothermal boundary—an approach we refer to as laser-assisted cryosurgery (LAC). The advantage of this procedure relative to conventional cryosurgery assisted with urethral warmers or cryoheaters is that laser heating provides volumetric rather than superficial heating, which leads to deeper penetration, more homogeneous tissue protection and better demarcation of the destructive freezing effect to a well-defined targeted volume. Tissue viability assays are performed using green fluorescence protein (GFP) as a viability marker and correlated with temperature history after performing LAC procedures on ex vivo mice hepatic tissue. The limit for cell denaturation at the irradiated surface predicted by GFP analysis is further confirmed using reverse transcription...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5c12k1mb</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Martínez-Suástegui, L</name>
      </author>
      <author>
        <name>Duperray, B</name>
      </author>
      <author>
        <name>Godinez, F</name>
        <uri>https://orcid.org/0000-0002-0951-8370</uri>
      </author>
      <author>
        <name>Guillén, G</name>
      </author>
      <author>
        <name>Slade, A</name>
      </author>
      <author>
        <name>Aguilar, G</name>
        <uri>https://orcid.org/0000-0001-7326-1162</uri>
      </author>
    </item>
    <item>
      <title>Silicon Derived from Glass Bottles as Anode Materials for Lithium Ion Full Cell Batteries</title>
      <link>https://escholarship.org/uc/item/4p11s880</link>
      <description>Every year many tons of waste glass end up in landfills without proper recycling, which aggravates the burden of waste disposal in landfill. The conversion from un-recycled glass to favorable materials is of great significance for sustainable strategies. Recently, silicon has been an exceptional anode material towards large-scale energy storage applications, due to its extraordinary lithiation capacity of 3579 mAh g−1 at ambient temperature. Compared with other quartz sources obtained from pre-leaching processes which apply toxic acids and high energy-consuming annealing, an interconnected silicon network is directly derived from glass bottles via magnesiothermic reduction. Carbon-coated glass derived-silicon (gSi@C) electrodes demonstrate excellent electrochemical performance with a capacity of ~1420 mAh g−1 at C/2 after 400 cycles. Full cells consisting of gSi@C anodes and LiCoO2 cathodes are assembled and achieve good initial cycling stability with high energy density.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/4p11s880</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Li, Changling</name>
      </author>
      <author>
        <name>Liu, Chueh</name>
      </author>
      <author>
        <name>Wang, Wei</name>
        <uri>https://orcid.org/0000-0001-6587-8859</uri>
      </author>
      <author>
        <name>Mutlu, Zafer</name>
      </author>
      <author>
        <name>Bell, Jeffrey</name>
      </author>
      <author>
        <name>Ahmed, Kazi</name>
      </author>
      <author>
        <name>Ye, Rachel</name>
      </author>
      <author>
        <name>Ozkan, Mihrimah</name>
        <uri>https://orcid.org/0000-0002-6224-5703</uri>
      </author>
      <author>
        <name>Ozkan, Cengiz S</name>
        <uri>https://orcid.org/0000-0001-6751-6851</uri>
      </author>
    </item>
    <item>
      <title>Analysis of Detection Enhancement Using Microcantilevers with Long-Slit-Based Sensors</title>
      <link>https://escholarship.org/uc/item/2zq00149</link>
      <description>The present work analyzes theoretically and verifies the advantage of utilizing rectangular microcantilevers with long-slits in microsensing applications. The deflection profile of these microcantilevers is compared with that of typical rectangular microcantilevers under the action of dynamic disturbances. Various force-loading conditions are considered. The theory of linear elasticity for thin beams is used to obtain the deflection-related quantities. The disturbance in these quantities is obtained based on wave propagation and beam vibration theories. It is found that detections of rectangular microcantilevers with long-slits based on maximum slit opening length can be more than 100 times the deflections of typical rectangular microcantilevers. Moreover, the disturbance (noise effect) in the detection quantities of the microcantilever with long-slits is found to be always smaller than that of typical microcantilevers, regardless of the wavelength, force amplitude, and the frequency...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/2zq00149</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Khaled, Abdul-Rahim A</name>
      </author>
      <author>
        <name>Vafai, Kambiz</name>
        <uri>https://orcid.org/0000-0002-9720-3618</uri>
      </author>
    </item>
    <item>
      <title>On the Role of Mechanics in Chronic Lung Disease</title>
      <link>https://escholarship.org/uc/item/0tp10954</link>
      <description>Progressive airflow obstruction is a classical hallmark of chronic lung disease, affecting more than one fourth of the adult population. As the disease progresses, the inner layer of the airway wall grows, folds inwards, and narrows the lumen. The critical failure conditions for airway folding have been studied intensely for idealized circular cross-sections. However, the role of airway branching during this process is unknown. Here, we show that the geometry of the bronchial tree plays a crucial role in chronic airway obstruction and that critical failure conditions vary significantly along a branching airway segment. We perform systematic parametric studies for varying airway cross-sections using a computational model for mucosal thickening based on the theory of finite growth. Our simulations indicate that smaller airways are at a higher risk of narrowing than larger airways and that regions away from a branch narrow more drastically than regions close to a branch. These results...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/0tp10954</guid>
      <pubDate>Wed, 20 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Eskandari, Mona</name>
        <uri>https://orcid.org/0000-0002-9657-2614</uri>
      </author>
      <author>
        <name>Pfaller, Martin R</name>
      </author>
      <author>
        <name>Kuhl, Ellen</name>
      </author>
    </item>
    <item>
      <title>Elucidating the Limit of Li Insertion into the Spinel Li4Ti5O12</title>
      <link>https://escholarship.org/uc/item/5xf913tx</link>
      <description>In this work, we show that the well-known lithium-ion anode material, Li4Ti5O12, exhibits exceptionally high initial capacity of 310 mAh g–1 when it is discharged to 0.01 V. It maintains a reversible capacity of 230 mAh g–1, far exceeding the “theoretical” capacity of 175 mAh g–1 when this anode is lithiated to the composition Li7Ti5O12. Neutron diffraction analyses identify that additional Li reversibly enters into the Li7Ti5O12 to form Li8Ti5O12. density functional theory (DFT) calculations reveal the average potentials of the Li4Ti5O12 to Li7Ti5O12 step and the Li7Ti5O12 to Li8Ti5O12 step are 1.57 and 0.19 V, respectively, which are in excellent agreement with experimental results. Transmission electron microscopy (TEM) studies confirm that the irreversible capacity of Li4Ti5O12 during its first cycle originates from the formation of a solid electrolyte interface (SEI) layer. This work clarifies the fundamental lithiation mechanism of the Li4Ti5O12, when lithiated to 0.01 V vs Li.</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/5xf913tx</guid>
      <pubDate>Tue, 19 May 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Liu, Haodong</name>
      </author>
      <author>
        <name>Zhu, Zhuoying</name>
        <uri>https://orcid.org/0000-0003-1775-7651</uri>
      </author>
      <author>
        <name>Huang, Jason</name>
      </author>
      <author>
        <name>He, Xin</name>
      </author>
      <author>
        <name>Chen, Yan</name>
      </author>
      <author>
        <name>Zhang, Rui</name>
      </author>
      <author>
        <name>Lin, Ruoqian</name>
        <uri>https://orcid.org/0000-0003-3907-2231</uri>
      </author>
      <author>
        <name>Li, Yejing</name>
      </author>
      <author>
        <name>Yu, Sicen</name>
      </author>
      <author>
        <name>Xing, Xing</name>
      </author>
      <author>
        <name>Yan, Qizhang</name>
      </author>
      <author>
        <name>Li, Xiangguo</name>
      </author>
      <author>
        <name>Frost, Matthew J</name>
      </author>
      <author>
        <name>An, Ke</name>
      </author>
      <author>
        <name>Feng, Jun</name>
      </author>
      <author>
        <name>Kostecki, Robert</name>
        <uri>https://orcid.org/0000-0002-4014-8232</uri>
      </author>
      <author>
        <name>Xin, Huolin</name>
      </author>
      <author>
        <name>Ong, Shyue Ping</name>
        <uri>https://orcid.org/0000-0001-5726-2587</uri>
      </author>
      <author>
        <name>Liu, Ping</name>
        <uri>https://orcid.org/0000-0002-1488-1668</uri>
      </author>
    </item>
    <item>
      <title>Green Fluorescent Protein as an Indicator of Cryoinjury in Tissues</title>
      <link>https://escholarship.org/uc/item/9pt9k4wb</link>
      <description>The fluorescence intensity of Green Fluorescent Protein (GFP) has previously been demonstrated to be an accurate indicator of cellular viability following cryoinsult in individual GFP-transfected cells. In an attempt to ascertain whether GFP fluorescence intensity may also be used as a viability indicator following cryogenic insults in whole tissues, this study examines the transient fluorescence intensity of GFP-transfected mouse hepatic tissue ex vivo following cryoinsult. The observed trends are compared with diffusion-based models. It was observed that the fluorescence intensity of the exposed tissues exhibited slow exponential decay, while the solution in which the tissues were placed inversely gained fluorescence. This slow decay (~3&amp;nbsp;h) is in contrast to the rapidly diminished fluorescence intensity (seconds) seen in GFP-cell cultures following cryoinsult. These trends suggest that mass diffusion of GFP in the interstitial space, and ultimately into the surrounding...</description>
      <guid isPermaLink="true">https://escholarship.org/uc/item/9pt9k4wb</guid>
      <pubDate>Tue, 28 Apr 2020 00:00:00 +0000</pubDate>
      <author>
        <name>Slade, Adam B</name>
      </author>
      <author>
        <name>Martínez-Suástegui, Lorenzo A</name>
      </author>
      <author>
        <name>Vié, Florian</name>
      </author>
      <author>
        <name>Aguilar, Guillermo</name>
        <uri>https://orcid.org/0000-0001-7326-1162</uri>
      </author>
    </item>
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