Accurate quantification of different soil organic carbon (SOC) fractions is needed to understand their relative importance in the global C cycle. Among the chemical methods of SOC fractionation, oxidative degradation is considered more promising because of its ability to mimic the natural microbial oxidative processes in soil. This study focuses on detailed understanding of changes in structural chemistry and isotopic signatures of SOC upon different oxidative treatments for assessing the ability of these chemicals to selectively isolate a refractory fraction of SOC. Replicated sampling (to ~1 m depth) of pedons classified as Typic Fragiudalf was conducted under four land uses (woodlot, grassland, no-till and conventional-till continuous corn [Zea mays L.]) at Wooster, OH. Soil samples (<2 mm) were treated with three oxidizing agents (hydrogen peroxide (H2O2), disodium peroxodisulfate (Na2S2O8) and sodium hypochlorite (NaOCl)). Oxidation resistant residues and the bulk soil from A1/Ap1 horizons of each land use were further analyzed by solid-state 13C nuclear magnetic resonance (NMR) spectroscopy and accelerator mass spectrometry to determine structural chemistry and 14C activity, respectively. Results indicated that, oxidation with NaOCl removed significantly less SOC compared to Na2S2O8 and H2O2. The NMR spectra revealed that NaOCl oxidation preferentially removed lignin-derived compounds at 56 ppm and at 110-160 ppm. On the other hand, the SOC resistant to Na2S2O8 and H2O2 oxidation were enriched with alkyl C groups, which dominate in recalcitrant macromolecules. This finding was corroborated by the 14C activity of residual material, which ranged from -542 to -259‰ for Na2S2O8 resistant SOC and -475 to -182‰ for H2O2 resistant SOC as compared to relatively greater 14C activity of NaOCl resistant residues (-47 to 61‰). Additionally, H2O2 treatment on soils after light fraction removal was more effective in isolating the oldest (14C activity of -725 to -469‰) SOC fraction. The Δ14C signature of SOC removed by different oxidizing agents, calculated by mass balance, was more or less similar irrespective of the difference in labile SOC removal efficiency. This suggests that SOC isolated by many fractionation methods is still a mixture of much younger and older material and therefore it is very important that the labile SOC should be completely removed before measuring the turnover time of stable and refractory pools of SOC. © 2009 Springer Science+Business Media B.V.

Reoxidation and mobilization of previously reduced and immobilized uranium by dissolved-phase oxidants poses a significant challenge for remediating uranium-contaminated groundwater. Preferential oxidation of reduced sulfur-bearing species, as opposed to reduced uranium-bearing species, has been demonstrated to limit the mobility of uranium at the laboratory scale yet field-scale investigations are lacking. In this study, the mobility of uranium in the presence of nitrate oxidant was investigated in a shallow groundwater system after establishing conditions conducive to uranium reduction and the formation of reduced sulfur-bearing species. A series of three injections of groundwater (200 L) containing U(VI) (5 μM) and amended with ethanol (40 mM) and sulfate (20 mM) were conducted in ten test wells in order to stimulate microbial-mediated reduction of uranium and the formation of reduced sulfur-bearing species. Simultaneous push-pull tests were then conducted in triplicate well clusters to investigate the mobility of U(VI) under three conditions: 1) high nitrate (120 mM), 2) high nitrate (120 mM) with ethanol (30 mM), and 3) low nitrate (2 mM) with ethanol (30 mM). Dilution-adjusted breakthrough curves of ethanol, nitrate, nitrite, sulfate, and U(VI) suggested that nitrate reduction was predominantly coupled to the oxidation of reduced-sulfur bearing species, as opposed to the reoxidation of U(IV), under all three conditions for the duration of the 36-day tests. The amount of sulfate, but not U(VI), recovered during the push-pull tests was substantially more than injected, relative to bromide tracer, under all three conditions and further suggested that reduced sulfur-bearing species were preferentially oxidized under nitrate-reducing conditions. However, some reoxidation of U(IV) was observed under nitrate-reducing conditions and in the absence of detectable nitrate and/or nitrite. This suggested that reduced sulfur-bearing species may not be fully effective at limiting the mobility of uranium in the presence of dissolved and/or solid-phase oxidants. The results of this field study confirmed those of previous laboratory studies which suggested that reoxidation of uranium under nitrate-reducing conditions can be substantially limited by preferential oxidation of reduced sulfur-bearing species.

Microbial assembly and metabolic potential in the subsurface critical zone (SCZ) are substantially impacted by subsurface geochemistry and hydrogeology, selecting for microbes distinct from those in surficial soils. In this study, we integrated metagenomics and geochemistry to elucidate how microbial composition and metabolic potential are shaped and impacted by vertical variations in geochemistry and hydrogeology in terrestrial subsurface sediment. A sediment core from an uncontaminated, pristine well at Oak Ridge Field Research Center in Oak Ridge, Tennessee, including the shallow subsurface, vadose zone, capillary fringe, and saturated zone, was used in this study. Our results showed that subsurface microbes were highly localized and that communities were rarely interconnected. Microbial community composition as well as metabolic potential in carbon and nitrogen cycling varied even over short vertical distances. Further analyses indicated a strong depth-related covariation of community composition with a subset of 12 environmental variables. An analysis of dissolved organic carbon (DOC) quality via ultrahigh resolution mass spectrometry suggested that the SCZ was generally a low-carbon environment, with the relative portion of labile DOC decreasing and that of recalcitrant DOC increasing along the depth, selecting microbes from copiotrophs to oligotrophs and also impacting the microbial metabolic potential in the carbon cycle. Our study demonstrates that sediment geochemistry and hydrogeology are vital in the selection of distinct microbial populations and metabolism in the SCZ. IMPORTANCE In this study, we explored the links between geochemical parameters, microbial community structure and metabolic potential across the depth of sediment, including the shallow subsurface, vadose zone, capillary fringe, and saturated zone. Our results revealed that microbes in the terrestrial subsurface can be highly localized, with communities rarely being interconnected along the depth. Overall, our research demonstrates that sediment geochemistry and hydrogeology are vital in the selection of distinct microbial populations and metabolic potential in different depths of subsurface terrestrial sediment. Such studies correlating microbial community analyses and geochemistry analyses, including high resolution mass spectrometry analyses of natural organic carbon, will further the fundamental understanding of microbial ecology and biogeochemistry in subsurface terrestrial ecosystems and will benefit the future development of predictive models on nutrient turnover in these environments.