The role of DOC for the build-up of soil organic carbon pools is still not well known, but it is thought to play a role in the transport of carbon to a greater depth where it becomes more stable. The aim of this study was to elucidate within-year dynamics of carbon transport from litter to the O (Oe and Oa) and A horizons. Mesocosms with constructed soil profiles were used to study dynamics of C transport from 14C-enriched (about 1000‰) leaf litter to the Oe/Oa and A horizons as well as the mineralization of leaf litter. The mesocosms were placed in the field for 17 months during which time fluxes and 14C content of DOC and CO2 were measured. Changes in 14C in leaf litter and bulk soil C pools were also recorded. Significant simultaneous release and immobilization of DOC occurring in both the O and A horizons was hypothesized. Contrary to our hypothesis, DOC released from the labeled Oi horizon was not retained within the Oe/Oa layer. DOC originating in the unlabeled Oe/Oa layer was also released for transport. Extensive retention of DOC occurred in the A horizon. DOC leaching from A horizon consisted of a mix of DOC from different sources, with a main fraction originating in the A horizon and a smaller fraction leached from the overlaying horizons. The C and 14C budget for the litter layer also indicated a surprisingly large amount of carbon with ambient Δ14C-signature to be respired from this layer. Data for this site also suggested significant contributions from throughfall to dissolved organic carbon (DOC) transport into and respiration from the litter layer. The results from this study showed that DOC retention was low in the O horizon and therefore not important for the O horizon carbon budget. In the A horizon DOC retention was extensive, but annual DOC input was small compared to C stocks and therefore not important for changes in soil C on an annual timescale. © 2008 Elsevier B.V.

The epigenome orchestrates genome accessibility, functionality, and three-dimensional structure. Because epigenetic variation can impact transcription and thus phenotypes, it may contribute to adaptation. Here, we report 1,107 high-quality single-base resolution methylomes and 1,203 transcriptomes from the 1001 Genomes collection of Arabidopsis thaliana. Although the genetic basis of methylation variation is highly complex, geographic origin is a major predictor of genome-wide DNA methylation levels and of altered gene expression caused by epialleles. Comparison to cistrome and epicistrome datasets identifies associations between transcription factor binding sites, methylation, nucleotide variation, and co-expression modules. Physical maps for nine of the most diverse genomes reveal how transposons and other structural variants shape the epigenome, with dramatic effects on immunity genes. The 1001 Epigenomes Project provides a comprehensive resource for understanding how variation in DNA methylation contributes to molecular and non-molecular phenotypes in natural populations of the most studied model plant.