Center for Bioinformatics and Molecular Biostatistics

Parent: UCSF

eScholarship stats: History by Item for July through October, 2026

Item	Title	Total requests	2026-10	2026-09	2026-08	2026-07
35x3v9t4	Machine Learning Benchmarks and Random Forest Regression	1,448	367	339	416	326
1f849890	Chess, Chance and Conspiracy	236	76	57	77	26
9qx2t2t2	Penalized Cox Regression Analysis in the High-Dimensional and Low-sample Size Settings, with Applications to Mi-croarray Gene Expression Data	156	48	30	56	22
0kk9r9pb	Re-Cracking the Nucleosome Positioning Code	144	40	39	44	21
71g3q1s9	Partial Cox Regression Analysis for High-Dimensional Microarray Gene Expression Data	117	43	35	28	11
35t29424	Identification of yeast transcriptional regulation networks using	110	51	22	28	9
2057b52d	Selective Genotyping and Phenotyping Strategies in a Complex Trait Context	107	35	30	22	20
8193v9bz	Regression Approaches for Microarray Data Analysis	106	30	16	37	23
5nn096hv	QTL Study Design from an Information Perspective	102	34	35	23	10
835236jg	Validation in Genomics: CpG Island Methylation Revisited	101	42	30	19	10
6pq5b964	Stepwise Normalization of Two-Channel Spotted Microarrays	94	22	15	20	37
1675f7db	A Novel Topology for Representing Protein Folds	93	32	20	36	5
5rr9k945	Clustering of translocation breakpoints	92	27	32	22	11
4159k2bc	A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays	88	21	15	43	9
53p64782	An algorithm for detecting phenotypic mutants for the JAX neuroscience mutagenesis facility	87	34	28	17	8
32p785g8	Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility	86	25	32	21	8
4597061w	Relating amino acid sequence to phenotype: Analysis of peptide binding data	86	23	21	25	17
6cx7s7d9	R/qtlDesign: Inbred Line Cross Experimental Design	79	25	20	23	11
3bx2f9h2	Predicting Progress in Shotgun Sequencing with Paired Ends	75	27	22	16	10
73f448zz	Microarray Gene Expression Data with Linked Survival Phenotypes: Diffuse Large-B-Cell Lymphoma Revisited	73	17	28	18	10
7wg7g30n	A note on the mating scheme used by the Mutagenesis Project	72	19	17	25	11
4cr9q577	Prediction of Genomewide Conserved Epitope Profiles of HIV-1: Classifier Choice and Peptide Representation	71	28	13	17	13
20w4t1qs	Functional Empirical Bayes Methods for Identifying Genes with Different Time-course Expression Profiles	70	17	19	24	10
0xz9q135	Cluster Computing: When Many Hands Make Light Work	68	23	27	12	6
5649n3vb	Identifying differentially expressed genes from microarray experiments via statistic synthesis	67	13	19	27	8
19s9g41s	Ascertainment-Adjusted Maximum Likelihood Estimation for the Additive Genetic Gamma Frailty Model	66	19	22	17	8
9fm8f8q5	Relating HIV-1 Sequence Variation to Replication Capacity via Trees and Forests	66	27	16	16	7
32t4f07x	A Hidden Markov Modeling Approach for Admixture Mapping Based on Case-Control Haplotype Data	63	21	16	16	10
3xc486h9	Analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4-5 in Splicing	60	18	17	13	12
6j184724	Dimension Reduction Methods for Microarrays with Application to Censored Survival Data	56	19	13	18	6
8v47p69q	On E-values for Tandem MS Scoring Schemes	51	23	7	15	6

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