Center for Bioinformatics and Molecular Biostatistics

Parent: UCSF

eScholarship stats: History by Item for April through July, 2026

Item	Title	Total requests	2026-07	2026-06	2026-05	2026-04
35x3v9t4	Machine Learning Benchmarks and Random Forest Regression	1,559	326	345	392	496
73f448zz	Microarray Gene Expression Data with Linked Survival Phenotypes: Diffuse Large-B-Cell Lymphoma Revisited	199	10	45	93	51
1f849890	Chess, Chance and Conspiracy	180	26	58	33	63
1675f7db	A Novel Topology for Representing Protein Folds	162	5	32	60	65
0kk9r9pb	Re-Cracking the Nucleosome Positioning Code	161	20	35	59	47
6cx7s7d9	R/qtlDesign: Inbred Line Cross Experimental Design	161	11	52	47	51
6pq5b964	Stepwise Normalization of Two-Channel Spotted Microarrays	161	37	42	42	40
4597061w	Relating amino acid sequence to phenotype: Analysis of peptide binding data	155	17	23	54	61
35t29424	Identification of yeast transcriptional regulation networks using	149	9	43	49	48
32p785g8	Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility	140	8	41	44	47
9qx2t2t2	Penalized Cox Regression Analysis in the High-Dimensional and Low-sample Size Settings, with Applications to Mi-croarray Gene Expression Data	140	22	38	37	43
20w4t1qs	Functional Empirical Bayes Methods for Identifying Genes with Different Time-course Expression Profiles	135	10	30	42	53
2057b52d	Selective Genotyping and Phenotyping Strategies in a Complex Trait Context	125	20	30	30	45
32t4f07x	A Hidden Markov Modeling Approach for Admixture Mapping Based on Case-Control Haplotype Data	123	10	29	48	36
9fm8f8q5	Relating HIV-1 Sequence Variation to Replication Capacity via Trees and Forests	117	7	29	40	41
4cr9q577	Prediction of Genomewide Conserved Epitope Profiles of HIV-1: Classifier Choice and Peptide Representation	114	13	28	41	32
71g3q1s9	Partial Cox Regression Analysis for High-Dimensional Microarray Gene Expression Data	111	11	23	36	41
8193v9bz	Regression Approaches for Microarray Data Analysis	111	23	13	34	41
8v47p69q	On E-values for Tandem MS Scoring Schemes	109	6	23	43	37
3bx2f9h2	Predicting Progress in Shotgun Sequencing with Paired Ends	105	10	27	28	40
0xz9q135	Cluster Computing: When Many Hands Make Light Work	101	6	27	35	33
835236jg	Validation in Genomics: CpG Island Methylation Revisited	97	9	29	23	36
5nn096hv	QTL Study Design from an Information Perspective	95	10	16	34	35
6j184724	Dimension Reduction Methods for Microarrays with Application to Censored Survival Data	90	6	22	32	30
53p64782	An algorithm for detecting phenotypic mutants for the JAX neuroscience mutagenesis facility	87	8	20	31	28
5rr9k945	Clustering of translocation breakpoints	83	11	13	27	32
4159k2bc	A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays	81	9	21	23	28
7wg7g30n	A note on the mating scheme used by the Mutagenesis Project	79	11	15	24	29
19s9g41s	Ascertainment-Adjusted Maximum Likelihood Estimation for the Additive Genetic Gamma Frailty Model	78	8	11	22	37
3xc486h9	Analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4-5 in Splicing	72	12	12	22	26
5649n3vb	Identifying differentially expressed genes from microarray experiments via statistic synthesis	67	8	15	22	22

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