Center for Bioinformatics and Molecular Biostatistics
Parent: UCSF
eScholarship stats: History by Item for March through June, 2025
| Item | Title | Total requests | 2025-06 | 2025-05 | 2025-04 | 2025-03 |
|---|---|---|---|---|---|---|
| 35x3v9t4 | Machine Learning Benchmarks and Random Forest Regression | 2,423 | 490 | 663 | 627 | 643 |
| 32p785g8 | Variants in the CDKN2B and RTEL1 regions are associated with high-grade glioma susceptibility | 100 | 45 | 15 | 18 | 22 |
| 9qx2t2t2 | Penalized Cox Regression Analysis in the High-Dimensional and Low-sample Size Settings, with Applications to Mi-croarray Gene Expression Data | 91 | 35 | 18 | 15 | 23 |
| 8v47p69q | On E-values for Tandem MS Scoring Schemes | 90 | 40 | 17 | 20 | 13 |
| 20w4t1qs | Functional Empirical Bayes Methods for Identifying Genes with Different Time-course Expression Profiles | 87 | 57 | 13 | 9 | 8 |
| 0kk9r9pb | Re-Cracking the Nucleosome Positioning Code | 86 | 40 | 23 | 11 | 12 |
| 1675f7db | A Novel Topology for Representing Protein Folds | 85 | 41 | 16 | 15 | 13 |
| 8193v9bz | Regression Approaches for Microarray Data Analysis | 84 | 40 | 20 | 11 | 13 |
| 71g3q1s9 | Partial Cox Regression Analysis for High-Dimensional Microarray Gene Expression Data | 82 | 43 | 15 | 11 | 13 |
| 35t29424 | Identification of yeast transcriptional regulation networks using | 80 | 35 | 24 | 9 | 12 |
| 1f849890 | Chess, Chance and Conspiracy | 79 | 34 | 22 | 8 | 15 |
| 4159k2bc | A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays | 78 | 34 | 17 | 14 | 13 |
| 2057b52d | Selective Genotyping and Phenotyping Strategies in a Complex Trait Context | 75 | 35 | 21 | 12 | 7 |
| 4cr9q577 | Prediction of Genomewide Conserved Epitope Profiles of HIV-1: Classifier Choice and Peptide Representation | 72 | 37 | 19 | 8 | 8 |
| 6cx7s7d9 | R/qtlDesign: Inbred Line Cross Experimental Design | 71 | 37 | 16 | 10 | 8 |
| 32t4f07x | A Hidden Markov Modeling Approach for Admixture Mapping Based on Case-Control Haplotype Data | 70 | 30 | 20 | 11 | 9 |
| 6j184724 | Dimension Reduction Methods for Microarrays with Application to Censored Survival Data | 67 | 29 | 19 | 9 | 10 |
| 4597061w | Relating amino acid sequence to phenotype: Analysis of peptide binding data | 66 | 38 | 14 | 8 | 6 |
| 73f448zz | Microarray Gene Expression Data with Linked Survival Phenotypes: Diffuse Large-B-Cell Lymphoma Revisited | 66 | 28 | 15 | 10 | 13 |
| 835236jg | Validation in Genomics: CpG Island Methylation Revisited | 66 | 33 | 17 | 9 | 7 |
| 6pq5b964 | Stepwise Normalization of Two-Channel Spotted Microarrays | 65 | 32 | 13 | 10 | 10 |
| 3xc486h9 | Analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4-5 in Splicing | 64 | 25 | 26 | 6 | 7 |
| 0xz9q135 | Cluster Computing: When Many Hands Make Light Work | 60 | 31 | 11 | 8 | 10 |
| 9fm8f8q5 | Relating HIV-1 Sequence Variation to Replication Capacity via Trees and Forests | 58 | 33 | 13 | 8 | 4 |
| 7wg7g30n | A note on the mating scheme used by the Mutagenesis Project | 55 | 28 | 14 | 6 | 7 |
| 3bx2f9h2 | Predicting Progress in Shotgun Sequencing with Paired Ends | 51 | 32 | 10 | 3 | 6 |
| 5rr9k945 | Clustering of translocation breakpoints | 51 | 28 | 15 | 4 | 4 |
| 19s9g41s | Ascertainment-Adjusted Maximum Likelihood Estimation for the Additive Genetic Gamma Frailty Model | 47 | 26 | 7 | 6 | 8 |
| 5nn096hv | QTL Study Design from an Information Perspective | 46 | 26 | 13 | 5 | 2 |
| 5649n3vb | Identifying differentially expressed genes from microarray experiments via statistic synthesis | 44 | 20 | 14 | 2 | 8 |
| 53p64782 | An algorithm for detecting phenotypic mutants for the JAX neuroscience mutagenesis facility | 37 | 17 | 11 | 5 | 4 |
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