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PrimerProspector: de novo design and taxonomic analysis of barcoded polymerase chain reaction primers
Published Web Location
https://doi.org/10.1093/bioinformatics/btr087Abstract
Motivation
PCR amplification of DNA is a key preliminary step in many applications of high-throughput sequencing technologies, yet design of novel barcoded primers and taxonomic analysis of novel or existing primers remains a challenging task.Results
PrimerProspector is an open-source software package that allows researchers to develop new primers from collections of sequences and to evaluate existing primers in the context of taxonomic data.Availability
PrimerProspector is open-source software available at http://pprospector.sourceforge.netContact
rob.knight@colorado.eduSupplementary information
Supplementary data are available at Bioinformatics online.Many UC-authored scholarly publications are freely available on this site because of the UC's open access policies. Let us know how this access is important for you.
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