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TopiaryExplorer: visualizing large phylogenetic trees with environmental metadata
Published Web Location
https://doi.org/10.1093/bioinformatics/btr517Abstract
Motivation
Microbial community profiling is a highly active area of research, but tools that facilitate visualization of phylogenetic trees and associated environmental data have not kept up with the increasing quantity of data generated in these studies.Results
TopiaryExplorer supports the visualization of very large phylogenetic trees, including features such as the automated coloring of branches by environmental data, manipulation of trees and incorporation of per-tip metadata (e.g. taxonomic labels).Availability
http://topiaryexplorer.sourceforge.net.Contact
rob.knight@colorado.edu.Many UC-authored scholarly publications are freely available on this site because of the UC's open access policies. Let us know how this access is important for you.
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