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An Evaluation of Protein-Ligand Interactions Through Diffusion Coefficients Determined via Taylor Dispersion Analysis
- Kozaka, Ryan
- Advisor(s): Rodgers, Victor GJ
Abstract
Previous methods to determine equilibrium binding constants of proteins interacting with
ligands include isothermal titration calorimetry, surface plasma resonance and
fluorescence polarization. In this work, diffusion coefficients determined through Taylor
dispersion analysis are used to obtain equilibrium binding constants and complex
diffusion coefficients of ligands interacting with proteins. An equation developed by
Jensen et al 2010 is used to fit a plot of measured diffusion coefficients versus ligand
concentration. The best fit of this equation provides the equilibrium binding constant and
the diffusion coefficient of the ligand interacting with the protein.