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Structure and function of a type III polyketide synthase involved in cannabinoid biosynthesis
- Gonzalez-DeWhitt, Kristofer R
- Advisor(s): Abramson, Jeff
Abstract
Cannabinoids are produced in Cannabis sativa L. via a highly modular process involving chemical precursors originating from the polyketide synthase and monoterpene biosynthetic pathways. In the polyketide synthase pathway, tetraketide synthase (TKS) catalyzes an imprecise reaction to produce a diffusible, linear tetra-β-ketide that is subsequently cyclized by an accessory protein to olivetolic acid. Alkylation, oxidative cyclization, and non-enzymatic decarboxylation of molecules derived from olivetolic acid produce the pharmaceutically important cannabinoids (-)-trans-Δ9-tetrahydrocannabinol (Δ9-THC) and cannabidiol (CBD). Besides producing a required pathway precursor, TKS generates multiple aberrant by-products that derail cannabinoid biosynthesis. Structure determination and site-directed mutagenesis experiments were conducted to clarify the TKS reaction mechanism. Crystal structures of TKS in complex with coenzyme A and a pentyl mono-β-ketide, pentyl di-β-ketide, or pentyl tri-β-ketide revealed that polyketide synthesis is facilitated by horizontal expansion of the cyclization pocket. Horizontal expansion is mediated by a single residue rotating outwards from the cyclization pocket. Substitutions truncating this residue’s sidechain improved olivetolic acid formation by 176%. Orthogonal structure-function experiments were conducted on hexaketide synthase (Drosophyllum lusitanicum) (DluHKS) and implicated a structural basis for aberrant by-products catalyzed by TKS. A crystal structure was determined for DluHKS and revealed a pentyl tri-β-ketide covalently attached in monomer A and a covalent pentyl di-β-ketide in monomer B. The pentyl tri-β-ketide is stabilized within the cyclization pocket via a hydrogen bond that additionally predisposes polyketide intermediates to lactonization. These collective efforts to determine the structural basis of TKS and DluHKS catalytic activity provide an updated understanding of the TKS reaction mechanism as well as suggestions for rationally mutating TKS for improved cannabinoid bioproduction.