Environ Genomics & Systems Bio

eScholarship stats: History by Item for March through June, 2026

Item	Title	Total requests	2026-06	2026-05	2026-04	2026-03
57f5059w	Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly	1,098	317	298	274	209
69z6h6mx	Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?	621	186	173	117	145
0xk6c2hf	Structures of a phycobilisome in light-harvesting and photoprotected states	612	153	206	139	114
9v80x6j2	Reduction of microbial diversity in grassland soil is driven by long-term climate warming	598	167	192	148	91
8sr171mx	Synthetic Scientific Image Generation with VAE, GAN, and Diffusion Model Architectures	591	173	159	148	111
3qf33012	Binary vector copy number engineering improves Agrobacterium-mediated transformation	448	134	134	113	67
9315g04c	The Artificial Intelligence Ontology: LLM-Assisted Construction of AI Concept Hierarchies	447	120	126	96	105
53j5t3m7	Phage therapy: From biological mechanisms to future directions	438	141	114	99	84
3qr0g3mh	Species- and site-specific genome editing in complex bacterial communities	436	66	63	91	216
7hk0577t	Environmental stress mediates groundwater microbial community assembly	432	109	138	93	92
8q63m69f	Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking	429	104	129	114	82
7956s6h6	The Human Phenotype Ontology in 2024: phenotypes around the world	425	121	114	108	82
2mq4z3j6	Complete biosynthesis of QS-21 in engineered yeast	424	129	131	98	66
2nt21413	CRAGE enables rapid activation of biosynthetic gene clusters in undomesticated bacteria	420	91	141	101	87
0636v49k	Unlocking the magic in mycelium: Using synthetic biology to optimize filamentous fungi for biomanufacturing and sustainability	419	131	99	108	81
51c8p1tp	Metagenomic and Metatranscriptomic Analyses Reveal the Structure and Dynamics of a Dechlorinating Community Containing Dehalococcoides mccartyi and Corrinoid-Providing Microorganisms under Cobalamin-Limited Conditions	419	116	133	123	47
9qm4q4zm	A metabolic modeling platform for the computation of microbial ecosystems in time and space (COMETS)	419	116	116	99	88
4sr1g8sv	Dynamic enhancer landscapes in human craniofacial development	417	90	129	118	80
0zs4n252	Implicating the red body of Nannochloropsis in forming the recalcitrant cell wall polymer algaenan	403	101	152	84	66
3wd3p1tm	Learning representations of microbe–metabolite interactions	400	105	107	97	91
8cv8h6f2	A Suite of Constitutive Promoters for Tuning Gene Expression in Plants	387	109	120	101	57
4391h0zc	Characterisation and comparative analysis of mitochondrial genomes of false, yellow, black and blushing morels provide insights on their structure and evolution	370	88	133	73	76
8zg6p5jr	The Human Phenotype Ontology in 2021	362	91	91	101	79
5c25c8j1	Characterization of Mammalian In Vivo Enhancers Using Mouse Transgenesis and CRISPR Genome Editing	352	77	126	82	67
2c40w6hv	A compendium of human gene functions derived from evolutionary modelling	351	132	94	80	45
2j30j157	A quantitative framework reveals ecological drivers of grassland microbial community assembly in response to warming	351	115	87	77	72
3z44x6vv	Enhancer redundancy provides phenotypic robustness in mammalian development	351	84	119	99	49
701467hb	The Gene Ontology resource: enriching a GOld mine	351	91	106	83	71
8zv742pc	Pre-Cambrian roots of novel Antarctic cryptoendolithic bacterial lineages	349	94	132	77	46
1ct062cx	Nitrogen Metabolism in Pseudomonas putida: Functional Analysis Using Random Barcode Transposon Sequencing	348	92	91	98	67
1253h6hs	Methylphosphonate Degradation and Salt-Tolerance Genes of Two Novel Halophilic Marivita Metagenome-Assembled Genomes from Unrestored Solar Salterns	347	62	94	94	97
05p6h8j3	Community standards and future opportunities for synthetic communities in plant–microbiota research	346	54	112	67	113
9gj3z2s7	Restoring wetlands on intensive agricultural lands modifies nitrogen cycling microbial communities and reduces N2O production potential	341	74	99	80	88
4px4r16v	Lignin synthesis and bioengineering approaches toward lignin modification	339	76	98	86	79
7c96t04w	Mutant phenotypes for thousands of bacterial genes of unknown function	339	88	94	98	59
20v234dt	The Gene Ontology knowledgebase in 2026	336	76	96	89	75
3q12x1gh	Perspectives for self-driving labs in synthetic biology	334	82	123	70	59
10h0243m	Sequential membrane- and protein-bound organelles compartmentalize genomes during phage infection	332	98	92	71	71
23x7d9r0	Environmental genomics reveals a single species ecosystem deep within the Earth	332	84	94	84	70
4562t20h	Specialized Plant Growth Chamber Designs to Study Complex Rhizosphere Interactions	321	66	108	79	68
60j7f44b	CAGI, the Critical Assessment of Genome Interpretation, establishes progress and prospects for computational genetic variant interpretation methods	318	27	84	82	125
63z6t8st	Microbial Ecology on Solar Panels in Berkeley, CA, United States	318	76	129	73	40
8s29j3r4	Chemical classification program synthesis using generative artificial intelligence	318	77	111	63	67
6481s5n4	Microbial Ecology and Site Characteristics Underlie Differences in Salinity‐Methane Relationships in Coastal Wetlands	311	67	71	92	81
3101x2rn	The genome of black cottonwood, Populus trichocarpa (Torr. & Gray)	310	63	68	109	70
6p94q2rz	A roadmap for the functional annotation of protein families: a community perspective	306	83	98	60	65
0m3378b9	Engineered plants provide a photosynthetic platform for the production of diverse human milk oligosaccharides	304	93	86	71	54
2321j386	Genome editing of a rice CDP-DAG synthase confers multipathogen resistance	304	91	95	55	63
6025s7dz	Zn deficiency disrupts Cu and S homeostasis in Chlamydomonas resulting in over accumulation of Cu and Cysteine.	304	20	206	39	39
1dn7880c	An ontology-based knowledge graph for representing interactions involving RNA molecules	301	63	111	61	66

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