Recent Work

Parent: Microbiology and Plant Pathology

eScholarship stats: History by Item for July through October, 2026

Item	Title	Total requests	2026-10	2026-09	2026-08	2026-07
80m7x5x5	Diet high in linoleic acid dysregulates the intestinal endocannabinoid system and increases susceptibility to colitis in Mice	732	75	257	339	61
6x297461	A global metagenomic map of urban microbiomes and antimicrobial resistance	526	178	95	111	142
7c175873	Virus infection triggers widespread silencing of host genes by a distinct class of endogenous siRNAs in Arabidopsis	456	24	87	336	9
9sg3c84v	Fungi are key players in extreme ecosystems	402	64	99	159	80
8zv742pc	Pre-Cambrian roots of novel Antarctic cryptoendolithic bacterial lineages	360	146	80	62	72
98r4f90g	Cotton plants export microRNAs to inhibit virulence gene expression in a fungal pathogen	351	79	69	124	79
90k2q84m	Pan-cancer analyses reveal cancer-type-specific fungal ecologies and bacteriome interactions	348	74	65	142	67
8345g1rw	Cost–benefit analysis of nanofertilizers and nanopesticides emphasizes the need to improve the efficiency of nanoformulations for widescale adoption	328	100	64	87	77
50m6r074	Infection with Bacteroides Phage BV01 Alters the Host Transcriptome and Bile Acid Metabolism in a Common Human Gut Microbe	325	95	57	137	36
4485m01m	The Fungal Tree of Life: from Molecular Systematics to Genome-Scale Phylogenies	320	121	77	85	37
2b3817x3	Fungal Morphogenesis, from the Polarized Growth of Hyphae to Complex Reproduction and Infection Structures	312	79	81	85	67
37g3j4sb	Spray‐induced gene silencing for disease control is dependent on the efficiency of pathogen RNA uptake	299	126	50	81	42
5ps719v0	Widespread adenine N6-methylation of active genes in fungi	293	162	36	40	55
0s32q793	Harnessing cross-border resources to confront climate change	291	111	58	46	76
1z2724ft	Sequencing the Genomes of the First Terrestrial Fungal Lineages: What Have We Learned?	290	151	32	31	76
9xg1p31w	Immunoglobulin A Coating Identifies Colitogenic Bacteria in Inflammatory Bowel Disease	279	54	116	73	36
6xr5x68f	Spray-Induced Gene Silencing: a Powerful Innovative Strategy for Crop Protection	246	89	72	51	34
7s96k8nc	Phylogenomic analyses of non-Dikarya fungi supports horizontal gene transfer driving diversification of secondary metabolism in the amphibian gastrointestinal symbiont, Basidiobolus	238	144	36	16	42
38d0x4hb	Mycoparasites, Gut Dwellers, and Saprotrophs: Phylogenomic Reconstructions and Comparative Analyses of Kickxellomycotina Fungi	232	117	48	33	34
71p5t489	Shed Light in the DaRk LineagES of the Fungal Tree of Life—STRES	229	127	20	31	51
2gr101xp	Phylogenomics of Endogonaceae and evolution of mycorrhizas within Mucoromycota	225	127	22	29	47
18k3s04n	Diversity of cytosine methylation across the fungal tree of life	223	113	32	32	46
0b0207vf	An endogenous DNA virus in an amphibian-killing fungus associated with pathogen genotype and virulence	218	37	50	56	75
1s06n2dw	FGF4 retrogene on CFA12 is responsible for chondrodystrophy and intervertebral disc disease in dogs	212	73	56	60	23
45z3n9fc	Psychoactive plant- and mushroom-associated alkaloids from two behavior modifying cicada pathogens	212	65	47	67	33
4mp2h2n6	Genome-scale phylogenetics reveals a monophyletic Zoopagales (Zoopagomycota, Fungi)	212	91	37	32	52
7tk1x1nr	Phylogenomic Analysis of a 55.1-kb 19-Gene Dataset Resolves a Monophyletic Fusarium that Includes the Fusarium solani Species Complex.	206	49	68	46	43
3qx856pd	Herptile gut microbiomes: a natural system to study multi-kingdom interactions between filamentous fungi and bacteria	196	65	40	38	53
3rc7z5g0	DNA virus BdDV-1 of the amphibian pathogen Batrachochytrium dendrobatidis is associated with hypervirulence	195	27	63	40	65
68s498n4	Small RNA-based antimicrobial immunity	195	52	45	44	54
0nt0t4k2	STREAMS guidelines: standards for technical reporting in environmental and host-associated microbiome studies	193	71	57	40	25
7mc1m7pv	Fungal biodiversity and conservation mycology in light of new technology, big data, and changing attitudes	193	59	40	46	48
4475v7sz	BioClay™ prolongs RNA interference‐mediated crop protection against Botrytis cinerea	191	51	49	60	31
7709k72w	Malassezia Is Associated with Crohn’s Disease and Exacerbates Colitis in Mouse Models	191	52	62	47	30
4ms72153	Effects of experimental nitrogen deposition on soil organic carbon storage in Southern California drylands	190	62	68	35	25
0061m1hf	Exploring the Effects of Trichoderma virens Biofungicide on Carrot Cavity Spot and Soil Fungal Community Dynamics	187	60	28	47	52
2cp1n2cg	Toward a Fully Resolved Fungal Tree of Life	187	67	35	58	27
7fv0c9tw	Future-Proofing Your Microbiology Resource Announcements Genome Assembly for Reproducibility and Clarity	187	112	24	18	33
8v83t6ng	Extremophilic and extremotolerant fungi	186	48	55	41	42
61k6n75t	Understudied, underrepresented, and unknown: Methodological biases that limit detection of early diverging fungi from environmental samples	179	58	62	40	19
9hx2w6dz	Parasitoid Jewel Wasp Mounts Multipronged Neurochemical Attack to Hijack a Host Brain* [S]	178	51	58	44	25
34d944c8	The pan-genome of Aspergillus fumigatus provides a high-resolution view of its population structure revealing high levels of lineage-specific diversity driven by recombination	175	52	40	53	30
2q20z718	Phyling: phylogenetic inference from annotated genomes	172	83	39	29	21
5mk8500v	A fungal phylogeny based on 42 complete genomes derived from supertree and combined gene analysis	170	38	59	57	16
7d24p85x	Adaptive Evolution of Sphingobium hydrophobicum C1T in Electronic Waste Contaminated River Sediment	169	83	35	18	33
1rv7q057	Unraveling the occasional occurrence of berry astringency in table grape cv. Scarlet Royal: a physiological and transcriptomic analysis	166	68	39	42	17
07m6b1zm	Structural basis for STAT2 suppression by flavivirus NS5	163	58	52	27	26
7pg3974q	Complete Nucleotide Sequence, Genome Organization, and Comparative Genomic Analyses of Citrus Yellow-Vein Associated Virus (CYVaV)	163	60	41	37	25
2dp8052n	A novel minimal in vitro system for analyzing HIV-1 Gag-mediated budding	162	20	13	122	7
0057c2k2	Ecological and Genomic Attributes of Novel Bacterial Taxa That Thrive in Subsurface Soil Horizons	161	55	30	32	44

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