- Bhattacharya, Arjun;
- Freedman, Anastasia N;
- Avula, Vennela;
- Harris, Rebeca;
- Liu, Weifang;
- Pan, Calvin;
- Lusis, Aldons J;
- Joseph, Robert M;
- Smeester, Lisa;
- Hartwell, Hadley J;
- Kuban, Karl CK;
- Marsit, Carmen J;
- Li, Yun;
- O’Shea, T Michael;
- Fry, Rebecca C;
- Santos, Hudson P
As the master regulator in utero, the placenta is core to the Developmental Origins of Health and Disease (DOHaD) hypothesis but is historically understudied. To identify placental gene-trait associations (GTAs) across the life course, we perform distal mediator-enriched transcriptome-wide association studies (TWAS) for 40 traits, integrating placental multi-omics from the Extremely Low Gestational Age Newborn Study. At [Formula: see text], we detect 248 GTAs, mostly for neonatal and metabolic traits, across 176 genes, enriched for cell growth and immunological pathways. In aggregate, genetic effects mediated by placental expression significantly explain 4 early-life traits but no later-in-life traits. 89 GTAs show significant mediation through distal genetic variants, identifying hypotheses for distal regulation of GTAs. Investigation of one hypothesis in human placenta-derived choriocarcinoma cells reveal that knockdown of mediator gene EPS15 upregulates predicted targets SPATA13 and FAM214A, both associated with waist-hip ratio in TWAS, and multiple genes involved in metabolic pathways. These results suggest profound health impacts of placental genomic regulation in developmental programming across the life course.