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Open Access Publications from the University of California

This series is automatically populated with publications deposited by UC Merced Department of Anthropology researchers in accordance with the University of California’s open access policies. For more information see Open Access Policy Deposits and the UC Publication Management System.

Cover page of Mapping Political Economies over Time, GIS Exercise 2: Cities and Water Transportation in 19th Century France

Mapping Political Economies over Time, GIS Exercise 2: Cities and Water Transportation in 19th Century France

(2017)

A Primer of Regional Systems Theory and Methods for the Study of Historical Economies, Societies and Polities, and their Integration into the Modern World System. Example of Cities in relation to Navigable Waterways in 19th Century France.

Cover page of Mapping Political Economies over Time, GIS Exercise 3: Urban Systems in 19th Century China

Mapping Political Economies over Time, GIS Exercise 3: Urban Systems in 19th Century China

(2017)

A Primer of Regional Systems Theory and Methods for the Study of Historical Economies, Societies and Polities, and their Integration into the Modern World System. Example of Urban Systems in 19th Century China.

Cover page of Mapping Political Economies over Time, GIS Exercise 1: Urban Systems in 19th Century France

Mapping Political Economies over Time, GIS Exercise 1: Urban Systems in 19th Century France

(2017)

A Primer of Regional Systems Theory and Methods for the Study of Historical Economies, Societies and Polities, and their Integration into the Modern World System. Example of France in the 19th century.

Cover page of Mapping Political Economies over Time, GIS Exercise 4: Comparing Urban Population Densities in 19th Century China and France

Mapping Political Economies over Time, GIS Exercise 4: Comparing Urban Population Densities in 19th Century China and France

(2017)

A Primer of Regional Systems Theory and Methods for the Study of Historical Economies, Societies and Polities, and their Integration into the Modern World System. Presents a methodology for mapping and comparing 19th Century Urban Population Densities between China and France.

Cover page of La guerra civil, la memoria social y la nación

La guerra civil, la memoria social y la nación

(2023)

Este artículo traza algunas ideas fundamentales que pueden orientar la forma de enfocar la memoria colectiva o social de la guerra civil de El Salvador y su conexión con la experiencia y la identidad nacional. Considera los temas de las memorias de grupo, las memorias como discurso, la memoria nacional, la historia versus la memoria, y el papel del silencio y el olvido. Realidad: Revista de Ciencias Sociales y Humanidades No. 153, 2019: 9-21

Cover page of Genetic Diversity of Yuca (Manihot esculenta esculenta; Cassava, Manioc), an Indigenous Crop in the Peruvian Amazon

Genetic Diversity of Yuca (Manihot esculenta esculenta; Cassava, Manioc), an Indigenous Crop in the Peruvian Amazon

(2023)

Yuca (Manihot esculenta esculenta; cassava, manioc) is a native Amazonian crop represented by myriad landraces. To investigate human influences on its diversification, we conducted field observations and analyzed 13 short tandem repeat (STR) loci in 43 landraces in the Peruvian Amazon. We found a different multilocus genotype (MLG) in every landrace. However, tests for Hardy–Weinberg equilibrium found a deficit of heterozygosity at every locus (p < 0.001 for 12 of 13 loci). Further, the fraction of genetic variance due to landrace differences was greater than expected (38.84%; p = 0.001). This suggested that landrace hybridization is restricted, a finding consistent with our field observations. However, we found an excess of within-landrace heterozygosity (p < 0.001) in 39 of 43 landraces, suggesting they originated through hybridization. Mantel tests identified associations between genetic and geographic distances (p < 0.001), but their correlation coefficients were low (Mantel’s r < 0.21). In addition, AMOVA analyses revealed that differences between landraces collected from five sampled rivers accounted for just 3.05% of observed genetic variance (p < 0.001). Neighbor joining and principal components analyses also revealed little evidence of differentiation between rivers. Finally, in a comparison with a secondary sample, we found that the closest relative of 27 of 28 specimens had a landrace name different from their own, suggesting that traditional nomenclature is a poor indicator of genetic relatedness.

Cover page of Twenty‐first century bioarchaeology: Taking stock and moving forward

Twenty‐first century bioarchaeology: Taking stock and moving forward

(2022)

This article presents outcomes from a Workshop entitled "Bioarchaeology: Taking Stock and Moving Forward," which was held at Arizona State University (ASU) on March 6-8, 2020. Funded by the National Science Foundation (NSF), the School of Human Evolution and Social Change (ASU), and the Center for Bioarchaeological Research (CBR, ASU), the Workshop's overall goal was to explore reasons why research proposals submitted by bioarchaeologists, both graduate students and established scholars, fared disproportionately poorly within recent NSF Anthropology Program competitions and to offer advice for increasing success. Therefore, this Workshop comprised 43 international scholars and four advanced graduate students with a history of successful grant acquisition, primarily from the United States. Ultimately, we focused on two related aims: (1) best practices for improving research designs and training and (2) evaluating topics of contemporary significance that reverberate through history and beyond as promising trajectories for bioarchaeological research. Among the former were contextual grounding, research question/hypothesis generation, statistical procedures appropriate for small samples and mixed qualitative/quantitative data, the salience of Bayesian methods, and training program content. Topical foci included ethics, social inequality, identity (including intersectionality), climate change, migration, violence, epidemic disease, adaptability/plasticity, the osteological paradox, and the developmental origins of health and disease. Given the profound changes required globally to address decolonization in the 21st century, this concern also entered many formal and informal discussions.

Cover page of The Life and Death of a Child: Mortuary and Bodily Manifestations of Coast–Interior Interactions during the Late Formative Period (AD 100–400), Northern Chile

The Life and Death of a Child: Mortuary and Bodily Manifestations of Coast–Interior Interactions during the Late Formative Period (AD 100–400), Northern Chile

(2022)

Camelid pastoralism, agriculture, sedentism, surplus production, increasing cultural complexity, and interregional interaction during northern Chile's Late Formative period (AD 100–400) are seen in the flow of goods and people over expanses of desert. Consolidating evidence of material culture from these interactions with a bioarchaeological dimension allows us to provide details about individual lives and patterns in the Late Formative more generally. Here, we integrate a variety of skeletal, chemical, and archaeological data to explore the life and death of a small child (Calate-3N.7). By taking a multiscalar approach, we present a narrative that considers not only the varied materiality that accompanies this child but also what the child's life experience was and how this reflects and shapes our understanding of the Late Formative period in northern Chile. This evidence hints at the profound mobility of their youth. The complex mortuary context reflects numerous interactions and long-distance relationships. Ultimately, the evidence speaks to deep social relations between two coastal groups, the Atacameños and Tarapaqueños. Considering this suite of data, we can see a child whose life was spent moving through desert routes and perhaps also glimpse the construction of intercultural identity in the Formative period.

Cover page of Smart three-dimensional processing of unconstrained cave scans using small unmanned aerial systems and red, green, and blue-depth cameras

Smart three-dimensional processing of unconstrained cave scans using small unmanned aerial systems and red, green, and blue-depth cameras

(2022)

This article focuses on a novel three-dimensional reconstruction system that maps large archeological caves using data collected by a small unmanned aircraft system with red, green, and blue-depth cameras. Cave sites often contain the best-preserved material in the archeological record. Yet few sites are fully mapped. Large caves environment usually contains complex geometric structures and objects, which must be scanned with long overlapped camera trajectories for better coverage. Due to the error in camera tracking of such scanning, reconstruction results often contain flaws and mismatches. To solve this problem, we propose a framework for surface loop closure, where loops are detected with a compute unified device architecture accelerated point cloud registration algorithm. After a loop is detected, a novel surface loop filtering method is proposed for robust loop optimization. This loop filtering method is robust to different scan patterns and can cope with tracking failure recovery so that there is more flexibility for unmanned aerial vehicles to fly and record data. We run experiments on public data sets and our cave data set for analysis and robustness tests. Experiments show that our system produces improved results on baseline methods.