Over the past decade, several methods have been developed
for the construction of DNA-encoded peptide libraries.
The common principle behind all these methods is the establishment
of a physical linkage between a displayed peptide
and its encoding DNA. Vast libraries can be generated, binding
peptides can be isolated with simple selections, and the
sequences of selected peptides can be rapidly determined
from the sequence of the linked DNA. As a result, DNAencoded
libraries can provide specific ligands for essentially
any protein. These ligands can be used to determine the natural
binding specificities of protein–protein interactions, and
this information can be used to identify natural binding partners
or to aid the design of organic mimics. Binding peptides
can also be used for target validation and the development of
high-throughput screens for small-molecule libraries. Finally,
binding peptides themselves could prove useful as drugs.