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Draft Genome of Burkholderia cenocepacia TAtl-371, a Strain from the Burkholderia cepacia Complex Retains Antagonism in Different Carbon and Nitrogen Sources
- Rojas-Rojas, Fernando Uriel;
- Sánchez-López, David;
- Tapia-García, Erika Yanet;
- Arroyo-Herrera, Ivan;
- Maymon, Maskit;
- Humm, Ethan;
- Huntemann, Marcel;
- Clum, Alicia;
- Pillay, Manoj;
- Palaniappan, Krishnaveni;
- Varghese, Neha;
- Mikhailova, Natalia;
- Stamatis, Dimitrios;
- Reddy, TBK;
- Ivanova, Natalia;
- Kyrpides, Nikos;
- Woyke, Tanja;
- Shapiro, Nicole;
- Hirsch, Ann M;
- Ibarra, J Antonio;
- Estrada-de los Santos, Paulina
- et al.
Published Web Location
https://doi.org/10.1007/s00284-019-01657-0Abstract
Burkholderia cenocepacia TAtl-371 was isolated from the rhizosphere of a tomato plant growing in Atlatlahucan, Morelos, Mexico. This strain exhibited a broad antimicrobial spectrum against bacteria, yeast, and fungi. Here, we report and describe the improved, high-quality permanent draft genome of B. cenocepacia TAtl-371, which was sequenced using a combination of PacBio RS and PacBio RS II sequencing methods. The 7,496,106 bp genome of the TAtl-371 strain is arranged in three scaffolds, contains 6722 protein-coding genes, and 99 RNA only-encoding genes. Genome analysis revealed genes related to biosynthesis of antimicrobials such as non-ribosomal peptides, siderophores, chitinases, and bacteriocins. Moreover, analysis of bacterial growth on different carbon and nitrogen sources shows that the strain retains its antimicrobial ability.
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