BioSciences

Parent: Lawrence Berkeley National Laboratory

eScholarship stats: Breakdown by Item for June through September, 2024

Item	Title	Total requests	Download	View-only	%Dnld
1h3515gn	BBMap: A Fast, Accurate, Splice-Aware Aligner	606	92	514	15.2%
57f5059w	Dynamic root exudate chemistry and microbial substrate preferences drive patterns in rhizosphere microbial community assembly	386	188	198	48.7%
22k9d6k9	Phytozome Comparative Plant Genomics Portal	314	3	311	1.0%
9v80x6j2	Reduction of microbial diversity in grassland soil is driven by long-term climate warming	294	250	44	85.0%
1xt5762k	Improving photosynthesis and crop productivity by accelerating recovery from photoprotection	256	168	88	65.6%
10s1g3f8	Genomes of multicellular algal sisters to land plants illuminate signaling network evolution	255	39	216	15.3%
5n75t404	Pre-metastatic niches: organ-specific homes for metastases	214	89	125	41.6%
9d4221mc	De novo DNA synthesis using polymerase-nucleotide conjugates	179	122	57	68.2%
25s902m0	Microbial production of advanced biofuels	160	113	47	70.6%
1fx8882v	Methods for obtaining and analyzing whole chloroplast genome sequences	158	34	124	21.5%
7956s6h6	The Human Phenotype Ontology in 2024: phenotypes around the world	144	47	97	32.6%
4zh090xt	Uncovering Earth’s virome	139	87	52	62.6%
7n8428f3	Genome resources for three modern cotton lines guide future breeding efforts.	138	33	105	23.9%
0zv4c34c	High allelic diversity in Arabidopsis NLRs is associated with distinct genomic features.	131	23	108	17.6%
3z44x6vv	Enhancer redundancy provides phenotypic robustness in mammalian development	131	50	81	38.2%
8cw2z936	UniProt-Related Documents (UniReD): assisting wet lab biologists in their quest on finding novel counterparts in a protein network.	129	15	114	11.6%
8rk2x6pj	A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome	129	107	22	82.9%
0qq0q564	Genomic Features and Pervasive Negative Selection in Rhodanobacter Strains Isolated from Nitrate and Heavy Metal Contaminated Aquifer	127	18	109	14.2%
0r48g3rc	Cultivation of novel Atribacterota from oil well provides new insight into their diversity, ecology, and evolution in anoxic, carbon-rich environments	125	35	90	28.0%
77j1n0fs	Novel fold of rotavirus glycan-binding domain predicted by AlphaFold2 and determined by X-ray crystallography	123	40	83	32.5%
81w457th	XA21-mediated resistance to Xanthomonas oryzae pv. oryzae is dose dependent	116	22	94	19.0%
8xb4w8w1	Diversity in the soil virosphere: to infinity and beyond?	116	36	80	31.0%
1cr3x9zb	BioHackathon 2015: Semantics of data for life sciences and reproducible research	114	38	76	33.3%
2ct9j9m4	Real-time bioelectronic sensing of environmental contaminants	114	90	24	78.9%
1c72w43z	Cryptic genetic structure and copy‐number variation in the ubiquitous forest symbiotic fungus Cenococcum geophilum	113	32	81	28.3%
3x71c44w	The network makeup artist (NORMA-2.0): distinguishing annotated groups in a network using innovative layout strategies.	113	9	104	8.0%
5zh738z7	Biochemical characterization of Fsa16295Glu from “Fervidibacter sacchari,” the first hyperthermophilic GH50 with β-1,3-endoglucanase activity and founding member of the subfamily GH50_3	113	31	82	27.4%
6nv0q883	De novo determination of mosquitocidal Cry11Aa and Cry11Ba structures from naturally-occurring nanocrystals	113	32	81	28.3%
0ms113jv	Engineered Production of Short-Chain Acyl-Coenzyme A Esters in Saccharomyces cerevisiae	112	35	77	31.3%
1q37q9td	A Miniaturized Programmable Multi-fluidic pneumatic for precise controls of sample preparation environment	112	19	93	17.0%
9fc4d66p	Phased diploid genome assembly with single-molecule real-time sequencing.	112	92	20	82.1%
0mb8h3r4	Designing and Engineering Methylorubrum extorquens AM1 for Itaconic Acid Production	111	37	74	33.3%
30v5j627	Clearance of senescent cells by ABT263 rejuvenates aged hematopoietic stem cells in mice	111	91	20	82.0%
8694191z	A novel d-xylose isomerase from the gut of the wood feeding beetle Odontotaenius disjunctus efficiently expressed in Saccharomyces cerevisiae	111	36	75	32.4%
7347s5hq	The Structural Basis of Coenzyme A Recycling in a Bacterial Organelle	110	18	92	16.4%
77f5s184	The flavonoid procyanidin C1 has senotherapeutic activity and increases lifespan in mice	110	23	87	20.9%
8f0519r0	Numerous cultivated and uncultivated viruses encode ribosomal proteins	110	17	93	15.5%
44m5x08n	MACAW: An Accessible Tool for Molecular Embedding and Inverse Molecular Design	109	38	71	34.9%
57h497xp	Thousands of small, novel genes predicted in global phage genomes	109	32	77	29.4%
7cx5710p	1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life	109	28	81	25.7%
0s12j707	σ54-dependent regulome in Desulfovibrio vulgaris Hildenborough	108	26	82	24.1%
69z6h6mx	Feed Your Friends: Do Plant Exudates Shape the Root Microbiome?	108	71	37	65.7%
7753n20x	Lipid metabolic changes in an early divergent fungus govern the establishment of a mutualistic symbiosis with endobacteria	108	28	80	25.9%
24q5m38w	The amphioxus genome and the evolution of the chordate karyotype	107	34	73	31.8%
2vm495r2	A Novel DNA Repair Gene Signature for Immune Checkpoint Inhibitor-Based Therapy in Gastric Cancer	107	29	78	27.1%
2z5184j0	Comparing in planta accumulation with microbial routes to set targets for a cost-competitive bioeconomy	107	28	79	26.2%
669604tj	A bacterial metapopulation adapts locally to phage predation despite global dispersal	107	30	77	28.0%
6jb5z7bf	Snapshot transient absorption spectroscopy: toward in vivo investigations of nonphotochemical quenching mechanisms	107	25	82	23.4%
9xj0x028	The mole genome reveals regulatory rearrangements associated with adaptive intersexuality	107	26	81	24.3%
7ct187h2	A monomeric mycobacteriophage immunity repressor utilizes two domains to recognize an asymmetric DNA sequence	106	29	77	27.4%

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