Wild pigs in North America carry multiple pathogens capable of causing diseases in wildlife, people, and domestic animals. Wild pigs are the reservoir host of pseudorabies virus (PrV) which is a fatal infection in wild carnivores. We previously conducted surveillance for PrV in wild pigs from Kern County, California where the distribution of wild pigs overlaps with native mountain lion. We found that 100% of wild pigs were exposed to PrV, and 6% were shedding the virus. Black bears and pumas have been observed preying on wild pigs in the region suggesting that they are vulnerable to exposure to PrV from pigs. We conducted retrospective, post-mortem surveillance for PrV on 16 pumas from five counties in south central California. None of the pumas tested positive for PrV. In Florida, PrV is attributed to one-third of the deaths in Florida panthers. Wild pigs are a large portion of the diet of panthers in Florida, but studies in California suggest pigs may not be utilized as frequently. This difference in diet could account for the lack of evidence that PrV causes measurable mortality in California pumas. Nonetheless, in management areas with carnivores, wild pig management should be carefully considered.

In today's world health events in one nation or geographic area often have repercussions for the health and well-being of populations beyond that region; sometimes even globally. In recent years many factors, most notably concern about emerging infectious diseases, have contributed to an increasing appreciation of the interdependency of human, animal and ecosystem health worldwide. Integrated global approaches to improve the health of humans, animals and their shared environments are proving to be in the best interest of many countries. A special symposium and award were established in memoriam to the internationally renowned epidemiologist, Dr. Calvin W. Schwabe, who (while at the University of California, Davis) was a significant advocate of the "One Medicine" approach to public health, calling upon all health professionals, including veterinarians, to work collaboratively and comparatively to improve human health. This paper discusses the evolution of the "One Medicine" concept into a global "One Health" approach to research, training capacity and service infrastructure, focused not only on disease, but also on health at the individual, population, and ecosystem levels. Projects involving UCD faculty which attempt to integrate a One Health approach include the Health for Animals and Livelihood Improvement (HALI) Project in Tanzania, Envirovet Summer Institute, Avian Flu School and Newcastle Immunization Program in Africa, a web-based virtual global health training program, and the Calvin Schwabe One Health Project.

In 2016, the Wildlife Investigations Lab initiated a statewide mountain lion health surveillance study to understand population health and anticoagulant rodenticide (AR) exposure. Exposure to first-generation (FGARs) and second-generation (SGARs) anticoagulant rodenticides are common in predators such as raptors, wild canids (i.e., foxes and coyotes) and bobcats. However, statewide data regarding rodenticide exposure in these species, including mountain lions, have been limited. Our objectives were to determine the statewide prevalence and geographic distribution of AR exposure in necropsied mountain lions. We used liquid chromatography/mass spectroscopy to detect rodenticides in liver samples from 111 (77 male: 34 female) mountain lion carcasses from 37 counties that died between Feb 2016 and Feb 2017. Necropsied carcasses were lions taken on depredation permits, vehicular strike, public safety, or other reasons. Overall, we detected ARs from the liver tissue of mountain lions from 35 counties with 105 of the 111 (94.5%) lions having exposure. We detected FGARs in 81 individuals (73%) from 33 counties and SGARs in 102 individuals (92%) from 35 counties. Seventy-eight individuals (70%) were exposed to both SGARs and FGARs while 6 (5%) individuals had no detectable AR concentration. Of the FGARs detected, diphacinone was the most common and was observed in 67% of sampled individuals. Brodifacoum was the most common SGAR, detected in 90% of sampled individuals. Exposure to FGARs was correlated with exposure to SGARs (χ2 = 5.8, p = 0.01). Exposure to ARs was not associated with lower body condition score. Although our study represents only one year of data, we demonstrate that exposure to both FGARs and SGARs is widespread in California’s mountain lions. We recommend continued AR screening of livers from mountain lion carcasses to further enhance our understanding about the relative contributions they may have on population health. Continued monitoring would also measure the effectiveness of regulatory changes intended to reduce non-target wildlife exposure to rodenticides

Microtus californicus scirpensis is an endangered, isolated subspecies of California vole. It requires water pools and riparian bulrush (Schoenoplectus americanus) and occupies some of the rarest habitat of any North American mammal. The minimally vegetated, extremely arid desert surrounding the pools is essentially uninhabitable for Ixodes species ticks. We describe an enzootic cycle of Borrelia carolinensis in Ixodes minor ticks at a site 3500 km distant from the region in which I. minor is known to occur in Tecopa Host Springs, Inyo County, eastern Mojave Desert, California. Voles were live-trapped, and ticks and blood samples queried by PCR and DNA sequencing for identification and determination of the presence of Borrelia spp. Between 2011-2013, we found 21 Ixodes minor ticks (prevalence 4-8%) on Amargosa voles and Reithrodontomys megalotis. DNA sequencing of 16S rRNA from ticks yielded 99% identity to I. minor. There was 92% identity with I. minor in the calreticulin gene fragment. Three ticks (23.1%), 15 (24%) voles, three (27%) house mice, and one (7%) harvest mice were PCR positive for Borrelia spp. Sequencing of the 5S-23S intergenic spacer region and flagellin gene assigned Amargosa vole Borrelia strains to B. carolinensis. Ixodes minor, first described in 1902 from a single Guatemalan record, reportedly occurs only in the southeast American on small mammals and birds. The source of this tick in the Mojave Desert and time scale for introduction is not known but likely via migratory birds. Borrelia strains in the Amargosa ecosystem most closely resemble B. carolinensis. B. carolinensis occurs in a rodent-I. minor enzootic cycle in the southeast U.S. although its epidemiological significance for people or rodents is unknown. The presence of a tick and Borrelia spp. only known from southeast U.S. in this extremely isolated habitat on the other side of the continent is of serious concern because it suggests that the animals in the ecosystem could be vulnerable to further incursions of pathogens and parasites.

The Amargosa vole is a highly endangered rodent endemic to a small stretch of the Amargosa River basin in Inyo County, California. It specializes on a single, nutritionally marginal food source in nature. As part of a conservation effort to preserve the species, a captive breeding population was established to serve as an insurance colony and a source of individuals to release into the wild as restored habitat becomes available. The colony has successfully been maintained on commercial diets for multiple generations, but there are concerns that colony animals could lose gut microbes necessary to digest a wild diet. We analyzed feces from colony-reared and recently captured wild-born voles on various diets, and foregut contents from colony and wild voles. Unexpectedly, fecal microbial composition did not greatly differ despite drastically different diets and differences observed were mostly in low-abundance microbes. In contrast, colony vole foregut microbiomes were dominated by Allobaculum sp. while wild foreguts were dominated by Lactobacillus sp. If these bacterial community differences result in beneficial functional differences in digestion, then captive-reared Amargosa voles should be prepared prior to release into the wild to minimize or eliminate those differences to maximize their chance of success.

Nutria (Myocastor coypus) are semi-aquatic rodents native to South America that were introduced into many countries outside their native range for fur-farming. Nutria are considered a pest species in many regions primarily because of their feeding and burrowing activities that damage water control structures, agricultural crops, and marsh vegetation, but they are also capable of supporting parasites and pathogens that could present health risks to humans and other animals (Howerth et al. 1994, Michel et al. 2001). Nutria populations in the United States are found in the Gulf of Mexico coast, the Atlantic coast, and the Pacific Northwest, where they are managed as invasive species or euthanized through local eradication efforts. Nutria in California were reportedly eradicated after a small-scale effort in the 1970s, but recently reappeared in the Central Valley in 2017. Nutria in California inhabit rivers, streams, lakes, and ponds where they exist alongside native aquatic mammals such as American beaver (Castor canadensis), common muskrat (Odontra zibethicus), and the North American river otter (Lontra canadensis). The re-emergence of nutria in the California Central Valley, nearly 50 years post eradication, necessitates further investigation into the impacts of this species. In this study, we investigated whether nutria in California serve as hosts for infectious agents that present spillover risk to susceptible host populations including native wildlife, domestic animals, and humans. We used histopathology, PCR, immunoassays, and morphologic identification of ectoparasites to evaluate the presence of pathogens or arthropod vectors in a subset of sixty-five nutria dispatched as part of a statewide eradication effort. Most nutria with lung tissue submitted for histopathology in this survey had evidence of interstitial pneumonia. The etiology was undetermined based on microscopic evaluation, and few were severe enough to have clinical significance. Further study to identify the etiology in these cases and better understand the implications of pneumonia in nutria may include culture, PCR, or metagenomic techniques. Some nutria had histopathologic evidence of hepatitis with intralesional cestodes. Molecular identification is needed to identify the species in these cases, although they morphologically resembled Taenia sp. Other infrequent findings included myocarditis, nephrosis, renal fibrosis, and dermatitis and orthokeratotic hyperkeratosis with pediculosis. PCR amplification and DNA sequencing of a region of the small subunit ribosomal RNA gene positively identified Giardia intestinalis from one nutria fecal sample. The sequence was aligned to previously described 18S rRNA sequences from the NCBI GenBank database for each assemblage (A-G), and was determined to be most closely related to assemblage B. Assemblages A and B are found in humans and are reported to be zoonotic (Thompson 2004). Further testing is warranted to determine the role of nutria in California as potential reservoirs for zoonotic G. intestinalis transmission. Three nutria were seropositive for L. interrogans, serovars Canicola and Pomona. We did not detect pathogenic Leptospira spp. by RT-PCR. Leptospirosis is common in California wildlife (Straub and Foley 2020) and the current role of nutria in the epidemiology of this disease is unclear. As the nutria population expands into new waterways with susceptible species including humans and native wildlife, continued monitoring is recommended to investigate nutria as a potential reservoir for Leptospirosis. Nutria had few ectoparasites overall. Ticks were identified as Dermacentor variabilis, a widely distributed North American tick species that been implicated in transmission of several bacterial pathogens, including Rickettsia spp. and F. tularensis (Eisen et al. 2017, Hecht et al. 2019). Fleas were identified as Pulex sp. and Orchopeas sp. Pulex sp. are a cosmopolitan species that may be a source of zoonotic pathogens, such as Bartonella spp. (Gabriel et al. 2009). Orchopeas sp. are common rodent fleas found in squirrels and woodrats and may be vectors for pathogens including Bartonella spp., Rickettsia spp. (Reeves et al. 2005), and Yersinia pestis (Davis et al. 2002) . This surveillance effort highlights the potential for nutria in California to serve as hosts for pathogens that can result in disease in humans and other animals and the importance of monitoring pathogens and parasites of invasive species within management or eradication programs. Future efforts to evaluate the role of nutria in disease transmission might include investigating additional pathogens, seasonal variations in disease prevalence, larger sample sizes, and surveys of native species sharing habitats with nutria.

Anticoagulant rodenticides (ARs) are used to control rodents around homes, buildings, and in agriculture. They have been found widely in predatory and scavenging wildlife as a result of secondary exposure and less commonly in herbivores and omnivores from primary exposure. While predators and scavengers have been monitored for AR exposure, very little information is available about AR residues in edible muscle tissue of game animals. Game animals may be exposed to ARs through direct consumption of bait, ingestion of contaminated food or vegetation, or consumption of contaminated prey items. Carcasses of three species of game animals (black bear, wild pigs, and mule deer) were collected opportunistically for this study from 2013 to 2015. Causes of death were mainly depredation, vehicular trauma, or hunter harvest. Sampling was performed in the field by California Department of Fish and Wildlife and US Department of Agriculture Wildlife Services staff. Tissues were analyzed for 37 deer in 11 counties, 120 wild pigs in 10 counties, and 12 bears in eight counties. The highest prevalence of AR exposure was found in bears, with 83% of tested livers containing ARs. Bear were most likely to be exposed to brodifacoum, a second generation AR used primarily in and around residences. Prevalence of exposure in wild pigs was 8.3%. Pigs were most likely to be exposed to chlorophacinone, used primarily in agriculture. More than half of pigs with AR residues in their liver also had AR residues in their muscle tissue. There were no AR detections in muscle samples tested for bears with AR residues in liver. None of the deer livers tested positive for ARs.

While metapopulation theory offers tractable means to understand extinction risks for patchily-distributed endangered species, real systems often feature discrepant patch quality and accessibility, complex influences of environmental stochasticity, and regional and temporal autocorrelation. Spatially structured metapopulation models are flexible and can use real data but often at the cost of generality. Particularly as resources for management of such species are often critically limited, endangered species management guided by metapopulation modeling requires incorporation of biological realism. Here we developed a flexible, stochastic spatially structured metapopulation model of the profoundly endangered Amargosa vole, a microtine rodent with an extant population of only a few hundred individuals within 1km2 of habitat in the Mojave Desert. Drought and water insecurity are increasing extinction risks considerably. We modelled subpopulation demographics using a Ricker-like model with migration implemented in an incidence function metapopulation model. A set of scenarios was used to assess the effect of anthropogenic stressors or management actions on expected time to extinction (Te) including: 1) wildland fire, 2) anthropogenically-mediated losses of hydrologic flows, 3) drought, 4) intentional expansion of existing patches into 'megamarshes' (i.e. via restoration/enhancement), and 5) additive impacts of multiple influences. In isolation, marshes could be sources or sinks, but spatial context within the full metapopulation including adjacency could alter relative impacts of subpopulations on all other subpopulations. The greatest reductions in persistence occurred in scenarios simulated with impacts from drought in combination with fire or anthropogenically-mediated losses of hydrologic flows. Optimal actions to improve persistence were to prevent distant and smaller marshes from acting as sinks through strategic creation of megamarshes that act as sources of voles and stepping-stones. This research reinforces that management resources expended without guidance from empirically-based modeling can actually harm species' persistence. This metapopulation-PVA tool could easily be implemented for other patchily-distributed endangered species and allow managers to maximize scarce resources to improve the likelihood of endangered species persistence.

Sarcoptic mange poses a serious conservation threat to endangered San Joaquin kit foxes (Vulpes macrotis mutica). After first appearing in Bakersfield, California in spring 2013, mange reduced the kit fox population approximately 50% until the epidemic ended with minimally detectable endemic cases after 2020. Mange is lethal and thus, with such a high force of infection and lack of immunity, it remains unclear why the epidemic did not burn itself out rapidly and how it persisted so long. Here we explored spatio-temporal patterns of the epidemic, analyzed historical movement data, and created a compartment metapopulation model (named "metaseir") to evaluate whether movement of foxes among patches and spatial heterogeneity would reproduce the eight years epidemic with 50% population reduction observed in Bakersfield. Our main findings from metaseir were that: 1) a simple metapopulation model can capture the Bakersfield-like disease epidemic dynamics even when there is no environmental reservoir or external spillover host, 2) the most impactful parameter on persistence and magnitude of the epidemic is the projection, β/αβ (transmission over decay rate of transmission over space), 3) heterogeneity in patch carrying capacities changes the critical value of the projection needed to achieve an epidemic but makes little difference to epidemic persistence time, and 4) the epidemic is relatively insensitive to birth rates and density vs. frequency-dependent transmission. Our model can help guide management and assessment of metapopulation viability of this vulpid subspecies, while the exploratory data analysis and model will also be valuable to understand mange in other, particularly den-occupying, species.

Intensive management may be necessary to protect some highly vulnerable endangered species, particularly those dependent on water availability regimes that might be disrupted by ongoing climate change. The Amargosa vole (Microtus californicus scirpensis) is an increasingly imperiled rodent constrained to rare wetland habitat in the Mojave Desert. In 2014 and 2016, we trapped and radio-collared 30 voles, 24 were translocated and six remained at donor and recipient marshes as resident control voles. Soft-release was performed followed by remote camera and radio-telemetry monitoring. Although comparative metrics were not statistically significant, the mean maximum known distance moved (MDM) was longer for translocated (82.3 ± 14.6 m) vs. resident-control voles (74.9 ± 17.5 m) and for female (98.4 ± 19.9 m) vs. male (57.8 ± 9.1 m) voles. The mean area occupied (AO) tended to be greater in female (0.15 ± 0.04 ha) vs. male (0.12 ± 0.03 ha) voles, and control voles (0.15 ± 0.05 ha) compared with translocated voles (0.13 ± 0.03 ha). The mean minimum known time alive (MTA) was 38.2 ± 19.4 days for resident-control voles and 47.0 ± 10.6 days for translocated voles. Female survival (55.7 ± 14.3 days) exceeded that of males (31.5 ± 9.4 days) regardless of study group. Activity in bulrush/rushes mix and bulrush vegetation types was strongly and significantly overrepresented compared with salt grass and rushes alone, and habitat selection did not differ between resident and translocated voles. Our results provide ecological and methodological insights for future translocations as part of a strategy of promoting long-term survival of an extremely endangered small mammal in a wild desert environment.