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Open Access Publications from the University of California

CENS, a NSF Science & Technology Center, is developing Embedded Networked Sensing Systems and applying this revolutionary technology to critical scientific and social applications. Like the Internet, these large-scale, distributed, systems, composed of smart sensors and actuators embedded in the physical world, will eventually infuse the entire world, but at a physical level instead of virtual. An interdisciplinary and multi-institutional venture, CENS involves hundreds of faculty, engineers, graduate student researchers, and undergraduate students from multiple disciplines at the partner institutions of University of California at Los Angeles (UCLA), University of Southern California (USC), University of California Riverside (UCR), California Institute of Technology (Caltech), University of California at Merced (UCM), and California State University at Los Angeles (CSULA).

Cover page of Visualizing microbial pollution in Santa Monica Bay with Geographic Information Systems (GIS) and through field-testing a rapid, robust, field-portable water detection sensing system

Visualizing microbial pollution in Santa Monica Bay with Geographic Information Systems (GIS) and through field-testing a rapid, robust, field-portable water detection sensing system

(2009)

Geographic Information Systems (GIS) is a powerful mapping tool that can be used to reveal spatial and temporal relationships of a criteria of interest. We have used GIS to visualize the seasonal and spatial distribution of microbial pollution obtained from the Heal the Bay beach water quality report (2007). These maps can be used to inform sampling decisions; more specifically, we can use it to identify areas of chronic pollution and can be used as a testbed for a rapid sensing system for bacteria. This rapid detection system can be used to provide higher resolution and understanding of water pollution as well as assist in understanding/characterizing environmental water quality in specific areas. We propose the subsequent use of an covalently-linked immumomagnetic separation/ATP quantification assay that is rapid, robust, and field-portable as an instrument to conduct monitoring of E. coli and Enterococcus in marine and freshwater systems.

Cover page of Physical, chemical, and biological factors shaping phytoplankton community structure in King Harbor, Redondo Beach, California

Physical, chemical, and biological factors shaping phytoplankton community structure in King Harbor, Redondo Beach, California

(2009)

Through the NAMOS project, our team of biologists and engineers are assisting municipalities in understanding the underlying causes and effects of harmful microalgal blooms. Since early 2007, we have been studying system-level dynamics of the chemical, physical, and biological processes in King Harbor, a shallow, semi-enclosed urban harbor in Redondo Beach, California. For the last two years a network of dock-based water quality sensors in the harbor has continuously provided data on the environmental parameters relevant to bloom formation. Additionally, intensive human-mediated studies of the phytoplankton community distribution and structure are testing several hypotheses on the biological and physical factors affecting algal growth in this system. Recent field experiments have sought to explain the roles of tidal forcing and phytoplankton behavior and physiology in the structuring and distribution of bloom-forming algal communities.

Cover page of Networked Robotic Sensor Platform Deployments for use in Coastal Environmental Assessment in Southern California

Networked Robotic Sensor Platform Deployments for use in Coastal Environmental Assessment in Southern California

(2009)

Mobile sensor platforms such as Autonomous Underwater Vehicles (AUVs) and robotic surface vessels, combined with static moored sensors compose a diverse sensor network that is able to provide macroscopic environmental analysis tool for ocean researchers. Working as a cohesive networked unit, the static buoys are always online, and provide insight as to the time and locations where a federated, mobile robot team should be deployed to effectively perform large scale spatio-temporal sampling on demand. Such a system can provide pertinent in situ measurements to marine biologists whom can then advise policy makers on critical environmental issues. This poster presents recent field deployment activity of AUVs demonstrating the effectiveness of our embedded communication network infrastructure throughout southern California coastal waters. We also report on progress towards real-time, web-streaming data from the multiple sampling locations and mobile sensor platforms. Static monitoring sites included in this presentation detail the network nodes positioned at Redondo Beach and Marina Del Ray. One of the deployed mobile sensors highlighted here are autonomous Slocum gliders. These nodes operate in the open ocean for periods as long as one month. The gliders are connected to the network via a Freewave radio modem network composed of multiple coastal base-stations. This increases the efficiency of deployment missions by reducing operational expenses via reduced reliability on satellite phones for communication, as well as increasing the rate and amount of data that can be transferred. Another mobile sensor platform presented in this study are the autonomous robotic boats. These platforms are utilized for harbor and littoral zone studies, and are capable of performing multi-robot coordination while observing known communication constraints. All of these pieces fit together to present an overview of ongoing collaborative work to develop an autonomous, region-wide, coastal environmental observation and monitoring sensor network.

Cover page of Tools for Dynamic Deployment and Data Management

Tools for Dynamic Deployment and Data Management

(2009)

CENS researchers are developing flexible wireless sensing technologies that can be used in a variety of scientific and social applications. These technologies produce data that often have value to both the immediate research questions and to longer-term studies of longitudinal phenomena. CENS sensing systems are being deployed in many different real-world settings. Managing sensor deployments and the resulting data can be difficult. This poster outlines our work in developing tools to help CENS researchers conduct deployments and manage the resulting data, specifically the CENS Deployment Center, Sensorbase, and the deployment webpages created for the Seismic Deployment in Peru. The CENS Deployment Center (CENSDC) is a web-based repository for CENS deployment information. The CENSDC provides a central location for researchers to document deployment activities through the creation of pre-deployment plans and post-deployment feedback/notes. By allowing users to describe their deployment experiences, including lessons learned, troubleshooting techniques, and guidance for future deployments, the CENSDC attempts to capture the tacit knowledge about equipment setups, deployment locations, and field preparations that play a critical role in data collection techniques. Sensorbase is a database for CENS sensor collected data. Users can set up automated data uploads into Sensorbase from remote wifi enabled nodes deployed in the field, enabling researchers to monitor and manage their data remotely. Sensorbase can also generate email alerts when user-defined conditional changes in data occur, eliminating the need to search through the collected data to see that something is wrong (or right) with the deployment. Also, a programmatic approach to doing some of the features previously allowed only in the web user interface has been implemented so that sensors in the field can do more without human interaction. Finally, Sensorbase allows users to designate all or portions of their data to be shared with other researchers. The Peru deployment is a joint UCLA and Caltech project to study seismic activity along the South American subduction zone. Along with the seismic data, the seismic team is collecting various kinds of technical data to measure the health of the seismic stations, as well as of the wireless networks that connect them to each other and to the internet. These measures help the seismic team to identify problems as they arise. We created a number of interfaces that display network health metrics for the installed stations to enable members of the seismic team to view the current status of the wireless links across the transect, and helping them to be more responsive to emerging problems. These tools facilitate more efficient sensor deployments by allowing researchers to discover problems with data in real-time, identify and describe the problems, and annotate the solutions for future deployments. Through this process, the resulting data should be of higher quality in the short term, and more easily used and reused in the long term.

Cover page of Subduction Zone Seismic Experiment in Peru: Results From a Wireless Seismic Network

Subduction Zone Seismic Experiment in Peru: Results From a Wireless Seismic Network

(2009)

This work describes preliminary results from a 50 station broadband seismic network recently installed from the coast to the high Andes in Peru. UCLA's Center for Embedded Network Sensing (CENS) and Caltech's Tectonic Observatory are collaborating with the IRD (French L'Institut de Recherche pour le Developpement) and the Institute of Geophysics, in Lima Peru in a broadband seismic experiment that will study the transition from steep to shallow slab subduction. The currently installed line has stations located above the steep subduction zone at a spacing of about 6 km. In 2009 we plan to install a line of 50 stations north from this line along the crest of the Andes, crossing the transition from steep to shallow subduction. A further line from the end of that line back to the coast, completing a U shaped array, is in the planning phase. The network is wirelessly linked using multi-hop network software designed by computer scientists in CENS in which data is transmitted from station to station, and collected at Internet drops, from where it is transmitted over the Internet to CENS each night. The instrument installation in Peru is almost finished and we have been receiving data daily from 47 stations (out of total 49) since Jan 2009. Two remain without any network connectivity. The software system provides dynamic link quality based routing, reliable data delivery, and a disruption tolerant shell interface for managing the system from UCLA without the need to travel to Peru. The near real-time data delivery also allows immediate detection of any problems at the sites. We are building a seismic data and GPS quality control toolset that would greatly minimize the station's downtime by alerting the users of any possible problems.

Cover page of Recruitment Services for Participatory Sensing Applications

Recruitment Services for Participatory Sensing Applications

(2009)

In traditional sensor systems, one of the fundamental problems concerns the placement of sensors. The analogous problem in participatory sensing is choosing users to perform a particular data collection task. This work details a recruitment framework that is designed to help with this process. Specifically, the framework considers the capabilities in terms of sensors available by a particular user, the availability of the user to participate in terms of spatial and temporal contexts, the reputation of the user as a data collector, and the incentive cost associated with the user participating as elements involved in the process of choosing data collectors. The utility of the recruitment service is shown through a series of campaigns related to ecological and sustainability monitoring.

Cover page of Field Operational Sensor and Lab-on-a-Chip System for Marine Environmental Monitoring and Analysis

Field Operational Sensor and Lab-on-a-Chip System for Marine Environmental Monitoring and Analysis

(2009)

This is a project that aims to expedite research in marine biology using chip-based and state-of-the-art detection technology. The project is a joint effort that will incorporate the expertise of three different groups, Dr. Chih-Ming Ho at UCLA, Dr. David Caron at USC and Dr. Yu-Chong Tai at Caltech. One main focus of the project is to develop Lab-on-a-chip devices that reduce total sample volume and detection time. Also, the chips can be fabricated in large quantities with minimal cost so many experiments can be run in parallel. Here at Caltech, a chip will be developed to culture a small number of algae and screen for factors inducing toxin production. Algal bloom and toxins produced by different algae have always caused problems to the environment and marine ecology. Pseudo-nitzschia is one type of algae that produces a neural toxin called Domoic Acid, which when transferred through the food chain causes sickness and mortality in marine mammals and seabirds. However, during Pseudo-nitzschia bloom, Domoic Acid is not always produced. In another word, growth of algae does not equal Domoic Acid production. Studies done by other groups have suggested that many factors (such as trace metal, macronutrient, or ionic concentration) might induce or suppress algae to produce toxin. Yet, exact causes are unclear. To completely elucidate the causes of toxin production, many potential compounds will have to be screened. This leads to an enormous amount of experiments to be performed and large quantity of reagents and cells to be used. To speed up the process of screening for possible factors inducing toxin production, we would like to make a chip to culture Pseudo-nitzschia under different growing conditions. At the same time, an Ultra Sensitive Electrochemical Sensor will be developed for detection of Domoic Acid at Dr. Chih-Ming Ho’s lab at UCLA. The current state-of-the-art detection technology indicates that per cell toxin load may range over 2 or 3 orders of magnitude but its sensitivity is limited since a sample size of at least 100 cells/mL is required. The new sensor will be able to push the sensitivity to 10 cells/mL or to even single molecules of Domoic Acid. This sensor will not only enable the detection of Domoic Acid produced by algae cells inside the culture chip, such sensor will also have the broad application of detecting Domoic Acid from field samples.

Cover page of Summer@CENS: a research internship program

Summer@CENS: a research internship program

(2009)

The Summer@CENS Research Scholars Program continues to be one of the key Education initiatives at CENS. The program is the core of our educational pipeline and is an excellent example of aligned Center research and education activities. The Summer@CENS Research Scholars Program serves as an umbrella for our undergraduate and high school summer research opportunities. It brings together talented undergraduates from around the country and local high school students to engage in Center research for 8-10 weeks over the summer. This poster highlights the structure of the program from planning to implementation as well as some of the outcomes resulting from the program. Also highlighted is the CENS Intel Scholars Program which allows us to extend the summer experience through the academic year for undergraduates at UCLA. This year, the CENS High School Scholars program has also been extended through the academic year to support continuation high school students in Central High School in the Mar Vista Projects.

Cover page of Overview of CENS Statistics and Data Practices Research

Overview of CENS Statistics and Data Practices Research

(2009)

Data, statistical models and inferential procedures permeate CENS deployments, from the four founding scientific application areas to the more recent urban sensing campaigns. This cross-center research breaks down into three classes of research: 1) General statistical models for embedded sensing, with specific applications to data quality and continuous sampling, 2) Significant CENS-designed and supported databases and repositories, and 3) Studies into the data lifecycle for embedded sensing systems.

Cover page of Using Imagers for Scaling Ecological Observations

Using Imagers for Scaling Ecological Observations

(2009)

Stationary and mobile ground-based cameras can be used to scale ecological observations, relating pixel information in images to in situ measurements. Currently there are four CENS projects that involve using cameras for scaling ecological observations: 1. Scaling from one individual to the landscape. Pan-Tilt-Zoom cameras can be zoomed in on a tight focus on individual plants and parts of individuals and then zoomed out to get a landscape view, composed of the same and similar species. 2. Estimating photosynthesis over large areas with HDR. High Dynamic Range imaging is a technique to capture an absolute amount of reflected light in an image. For a meadow composed of similarly reflecting species, we can estimate light received by leaves and thus photosynthesis over a wide area. 3. Scaling soil surface temperature measurements. Soil surface temperatures and soil energy balance are related to solar radiation and air temperature. Sunflecks captured with a camera taking panoramic mosaics of images can be used to estimate the radiation load for large areas of unobstructed understory. 4. Expanding plant phenological observations with a nation-wide network of webcams. Twice-daily images from over 1000 internet-connected and freely available cameras have been collected since February 2008. The advance of Spring can be tracked as a "green-up" and related to satellite remote sensing signals.