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Rapid metagenomic identification of viral pathogens in clinical samples by real-time nanopore sequencing analysis

  • Author(s): Chiu, Charles
  • Greninger, AL
  • Naccache, SN
  • Federman, S
  • Yu, G
  • Mbala, P
  • Bres, V
  • Stryke, D
  • Bouquet, J
  • Somasekar, S
  • Linnen, JM
  • et al.

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© 2015 Greninger et al.We report unbiased metagenomic detection of chikungunya virus (CHIKV), Ebola virus (EBOV), and hepatitis C virus (HCV) from four human blood samples by MinION nanopore sequencing coupled to a newly developed, web-based pipeline for r

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