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TRviz: a Python library for decomposing and visualizing tandem repeat sequences

Published Web Location

https://doi.org/10.1093/bioadv/vbad058
Abstract

Summary

TRviz is an open-source Python library for decomposing, encoding, aligning and visualizing tandem repeat (TR) sequences. TRviz takes a collection of alleles (TR containing sequences) and one or more motifs as input and generates a plot showing the motif composition of the TR sequences.

Availability and implementation

TRviz is an open-source Python library and freely available at https://github.com/Jong-hun-Park/trviz. Detailed documentation is available at https://trviz.readthedocs.io.

Supplementary information

Supplementary data are available at Bioinformatics Advances online.

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