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Open Access Publications from the University of California

Complete genome sequence of Oceanithermus profundus type strain (506).

  • Author(s): Pati, Amrita
  • Zhang, Xiaojing
  • Lapidus, Alla
  • Nolan, Matt
  • Lucas, Susan
  • Del Rio, Tijana Glavina
  • Tice, Hope
  • Cheng, Jan-Fang
  • Tapia, Roxane
  • Han, Cliff
  • Goodwin, Lynne
  • Pitluck, Sam
  • Liolios, Konstantinos
  • Pagani, Ioanna
  • Ivanova, Natalia
  • Mavromatis, Konstantinos
  • Chen, Amy
  • Palaniappan, Krishna
  • Hauser, Loren
  • Jeffries, Cynthia D
  • Brambilla, Evelyne-Marie
  • Röhl, Alina
  • Mwirichia, Romano
  • Rohde, Manfred
  • Tindall, Brian J
  • Sikorski, Johannes
  • Wirth, Reinhard
  • Göker, Markus
  • Woyke, Tanja
  • Detter, John C
  • Bristow, James
  • Eisen, Jonathan A
  • Markowitz, Victor
  • Hugenholtz, Philip
  • Kyrpides, Nikos C
  • Klenk, Hans-Peter
  • Land, Miriam
  • et al.

Oceanithermus profundus Miroshnichenko et al. 2003 is the type species of the genus Oceanithermus, which belongs to the family Thermaceae. The genus currently comprises two species whose members are thermophilic and are able to reduce sulfur compounds and nitrite. The organism is adapted to the salinity of sea water, is able to utilize a broad range of carbohydrates, some proteinaceous substrates, organic acids and alcohols. This is the first completed genome sequence of a member of the genus Oceanithermus and the fourth sequence from the family Thermaceae. The 2,439,291 bp long genome with its 2,391 protein-coding and 54 RNA genes consists of one chromosome and a 135,351 bp long plasmid, and is a part of the Genomic Encyclopedia of Bacteria and Archaea project.

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