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Robust transcriptome-wide discovery of RNA-binding protein binding sites with enhanced CLIP (eCLIP)
- Van Nostrand, Eric L;
- Pratt, Gabriel A;
- Shishkin, Alexander A;
- Gelboin-Burkhart, Chelsea;
- Fang, Mark Y;
- Sundararaman, Balaji;
- Blue, Steven M;
- Nguyen, Thai B;
- Surka, Christine;
- Elkins, Keri;
- Stanton, Rebecca;
- Rigo, Frank;
- Guttman, Mitchell;
- Yeo, Gene W
Published Web Location
https://doi.org/10.1038/nmeth.3810Abstract
Enhanced CLIP yields complex libraries of RNA components of ribonucleoprotein complexes and maintains single-nucleotide resolution of binding sites. eCLIP enables large scale profiling, as demonstrated with the binding profiles of 73 RBPs in two human cancer cell lines.
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