- Main
Multiscale stochastic simulation algorithm with stochastic partial equilibrium assumption for chemically reacting systems
Published Web Location
http://www.sciencedirect.com/science/article/B6WHY-4FG4VGB-1/2/f432f1aa03a67e66bc6ef29c618a0226Abstract
In this paper, we introduce a multiscale stochastic simulation algorithm (MSSA) which makes use of Gillespie's stochastic simulation algorithm (SSA) together with a new stochastic formulation of the partial equilibrium assumption (PEA). This method is much more efficient than SSA alone. It works even with a very small population of fast species, Implementation details are discussed, and an application to the modeling of the heat shock response of E. Coli is presented which demonstrates the excellent efficiency and accuracy obtained with the new method. (c) 2005 Elsevier Inc. All rights reserved.
Many UC-authored scholarly publications are freely available on this site because of the UC's open access policies. Let us know how this access is important for you.
Main Content
Enter the password to open this PDF file:
-
-
-
-
-
-
-
-
-
-
-
-
-
-