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Tracking the redox reaction of the iron enzyme ribonucleotide reductase using continuous SerialED and SFX
- Pacoste, Laura;
- Kumar, Rohit;
- Srinivas, Vivek;
- Makita, Hiroki;
- Simon, Philipp S;
- Bannerjee, Rahul;
- Minnetian, Natalie M;
- Bhowmick, Asmit;
- Paley, Daniel W;
- Mittan-Moreau, David W;
- Chatterjee, Kuntal;
- Rosenberg, Daniel J;
- Batyuk, Alexander;
- Gee, Leland B;
- Alonso-Mori, Roberto;
- Sauter, Nicholas K;
- Yano, Junko;
- Yachandra, Vittal K;
- John, Juliane;
- Aurelius, Oskar;
- Brewster, Aaron S;
- Kern, Jan F;
- Blomberg, Buster;
- Lebrette, Hugo;
- Xu, Hongyi;
- Hofer, Gerhard;
- Högbom, Martin;
- Zou, Xiaodong
Published Web Location
https://doi.org/10.1016/j.str.2026.03.006Abstract
Serial femtosecond crystallography (SFX) and continuous serial electron diffraction (c-SerialED) both enable high-resolution structure determination from protein microcrystals with minimal radiation damage, making it ideal for studying redox-active metalloenzymes. Here, c-SerialED and SFX were used to solve structures of the class Ia ribonucleotide reductase R2 subunit in oxidized (FeIII-FeIII), reduced (FeII-FeII), and re-oxidized states at ∼1.8 Å resolution, capturing three points in a redox reaction. These results demonstrate that c-SerialED can track reversible changes at the redox-site, enabling future time-resolved studies. Comparison between c-SerialED structures and SFX diffraction and emission data confirmed minimal radiation damage. Furthermore, previously reported structures use mercury in the crystallization condition and show mercury-induced conformational changes. Here, we use mercury-free crystallization conditions and reveal a water molecule in the redox center of the reduced state, absent in the previous structures, making these structures more representative of the physiological state.
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