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Open Access Publications from the University of California

Discovering Low-Dimensional Causal Pathways between Multiple Interacting Neuronal Populations

Abstract

Understanding the nature of neural activity and computations in the brain will help us build better decision-making models to facilitate human-AI collaboration. Recording the neural activity of multiple and large neural populations in the brain is becoming widely available with modern recording techniques. It still remains a challenge, however, to understand how distinct and anatomically different neural populations interact with each other to control behaviour. We propose a new method to discover causal interactions between neural populations based on recurrent switching dynamical systems. We introduce an extended dynamics model that incorporates the current time-step when calculating the latent state variables. We also introduce an acyclicity constraint in learning the parameters of the model. These mechanisms enable rich causal interactions between neural populations to be identified from the learned model. Our model outperforms previous work on discovering interactions between neural populations in simulated datasets, without sacrificing the prediction performance of firing rates. We also apply our method on real neural recordings from two Macaque monkey brains performing a behavioral task, and show that the proposed method is able to detect causal interactions between brain regions related to the different time windows of the task.

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